XLOC_012866


Basic Information

Item Value
gene id XLOC_012866
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 31519578 ~ 31521691 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00026910
gcttatgacaatcttttttattaatgtttgaggctgtgtatttttttttctctctctctgtctttcttattttttgttattgtattttttcttcaatgcagtgatgttattattcttgtattcaataaaaaaaaaaaaaaaagataaaataaataaaaaaaaaaataaaaaaaaatgaagcttACTGTAGGCGTGGTCAGCCGTCGCCATCTTGGAAATGCGTCATTCTCGGATACTCGAAAATGGGCAGAGGCGGATCTTAGGGGGAGTTAAGATTACAGTTTGCTGAAACCATAGAGACCATCCCACCACCCGCGACATTTGAATCATTTGAACATCTCAGCGTACTATCGAGTTATTGATTGCTGCTTACATCATGGCCTCCTCTGAAACATCCTCATCCACGTCTGTTAGGTCacaaaaattaaactACACAGTGTGGATCATTGGTGACAGTTATGTCCGACGAGGTGCCCAGAGAGCGCAGGAGACTGTGGGCAACAACCTTGGGCTGCCTGGGGCCCATATCTCTTGGTTTGGCTGGGGCGGTTTAAGGTGGAAACGACTTCCAAAATACTTCCAGGACTTGATTAAAGGAAGAGTCGTACCAGATGTCCTTGTCCTTCATTGTGGAGGAAATGATATTGGGGAGGTCACCAGCGTCCTGCTGGTGAACTCAATGAAAGAGGACTTGCTCCAGATGAAGCTCCAGCACCCTGATATGAAAATTTTGTTTTCATCTTTAACACAGAGGTGCTGGTGGAAGGCTGGTGCTAAGCCAGCTAAACTTGACAAGGCCCGGAAATTTGTTAACAGTGTTATGGCTACATTTGTTGATAGCCTAAATGGTGCCATGATTATGCACTCTCACATTAGACATGACAGTCTTGGGCTATTCCTAAAAGATGGAGTTCATTTCACACCTATgggaaattatatttttttaagcagTATTGCCAACTGCCTTAAAGACCACATTCAAATGCAGTGAACAGCCAATAGTGTCACTGCTTTTGAATTTGGGCTTTAGGGCCCATTTGATTTAAATAGCCTTGACCATTATGGCTAATGtagagttttttttatgtttattcttaAGTGCCATTTGTAGGCATAACACTGTTAACCTCTGCTTTtcatatagtttatttttttattttattattattattattacttttaatcaTTCACAAATTTTTGAAATAttg

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00026910 True 1208 lncRNA 0.39 3 31519578 31521691

Neighbor

gene id symbol gene type direction distance location
XLOC_012865 NA coding upstream 60091 31280850 ~ 31459487 (+)
XLOC_012864 tcf25 coding upstream 312920 31117136 ~ 31206658 (+)
XLOC_012863 NA coding upstream 443959 31073243 ~ 31075619 (+)
XLOC_012862 mvda coding upstream 450823 31056645 ~ 31068755 (+)
XLOC_012861 cd151l coding upstream 496131 30998472 ~ 31023447 (+)
XLOC_012867 dhx36 coding downstream 89053 31610744 ~ 31837760 (+)
XLOC_012868 BX908763.1 coding downstream 323813 31845504 ~ 31846556 (+)
XLOC_012869 NA coding downstream 350330 31872021 ~ 31872676 (+)
XLOC_012870 NA coding downstream 477517 31999208 ~ 32002709 (+)
XLOC_012871 BX908386.1 coding downstream 496410 32018101 ~ 32023119 (+)
XLOC_012854 NA non-coding upstream 1387747 30129771 ~ 30131831 (+)
XLOC_012849 CT025546.2 non-coding upstream 2344370 29175093 ~ 29175208 (+)
XLOC_012845 CR769777.2 non-coding upstream 3215261 28303891 ~ 28304317 (+)
XLOC_012872 NA non-coding downstream 518605 32040296 ~ 32041964 (+)

Expression


Co-expression Network