CI01000310_00003244_00012743


Basic Information

Item Value
gene id CI01000310_00003244_00012743
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000310
NCBI id null
chromosome length 5141163
location 3244 ~ 12914 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000310_00003244_00012743.mRNA
ATGGAATCAGAGCCATTTGAAGTTGTAGCCCTAGGAAGACCTCTGTTTCCTGGTATGCTGTATGACTGCCGCAAGGATTCCTTCATTCCAGGTGTTACTCTGTGGGATAAGAAATCATTGAGTGAAGATTTGGACAGTCGTCCGCAACTCATGACAGATTTGAAGTTCAGTAGCTCTGATTCTCTCTCTAGTAAATCCAGTCTCCTGGATATAAGTGCTTCCCTGAAGGCCAGCTTTCTGGGGGGGCTGGTGGAGGTAGGAGGATCTGCCAAATACCTGCAAGACACCAAATCCTCAAACAAACAGTCCCGAGTTACAATGTATTATAGTGATACTTCCAGATTCGAACAGCTCACTATGACCCAACTGGGCAAGATCACCTACCCCCAGGTGTTTGACCAGAAAACTGCAACTCATGTGGTCACGGCTGTTCTGTACGGAGCTCAGGCCTTCATGGTGTTTGATATGATGTCTTCAGAAGGTGAAAGCAAGCAGGAGACTGAGGGAAAACTGAATGTCATGGTCAAGAAGATTCCTGAATTTTCTATTGAGGGAGAAGGATCTGTAGCAATGACAGATGGTGAAAAGAAAACCGCTGAGAATATCAACTGCACATTTCATGGTGACTTTCATCTTGAGCAGAACCCCACCACATACATGGAGGCCCTGGATTTGTACAAGCAGCTCCCCACTCTGCTGAAGGAGAATCCAAAGAATGCAGTTCCAATAAAAGTCTGGCTATATCCTCTTTATTTATTGGACAAAAAAGCCGCTCAGTTAGAGAGAGAAATCAGCACACGTCTGGTTTCCAACACTGCAGATATAATGGAGGAGCTGGGAAAGGTAGAGAGGACATGCAACGACCTGTCCAGAAGAACAGAGGTAAATTTTTTCAGTGACATTCAAGAGAGGCTGCACTCATTTCAGGACTCATTTAGCATTTACAAGACAGTGTTTCAGAAGGCAGTGGCCAGGGTCTTGCCTGCTATTCGAGGAGGAGGAGAGAAGGAGGAGAAACTGGGAGATATCCTGAAGATCCACTACAGCTCCCCTTTTAATGCTGACAAGCTTAACCAGTGGTTACATGATGCAAAGTCTGAACTTGACCTCTTGCGCACTCACACCAGGAAGCTGGAGCAGATCAAAATTGAAAACTTTGATGATCTGAACACCATTCTCCTTGATCCTGATATTGATGTTGTGTTGTGCTTGACCTTCACATCTCTGAAGTATAAAGACCCATATCTTTCAACCCTAAATGAGTTCCTGAAATCTGATAAGTTTAAAAAGTTAGTTGGAAACAAAAATGCATCTGTCGGAAAATGGTTTAATGATCCTGATGTAATAGAAAAGATGAGAGAGAACTTATCTCTCTTCAGAGGTTTTTTAGAAGCCAATAAAGATAAAAAGAGAATCCACTTCATTATTTCTGCTGTCTCTGATCCCTCCAATCCAGGCTCCTCAATCTATTTGTACGAAAAAGGGAATCTGACAGACAAACAGTTCCAGCCTGTGTCAAAGCCGCCCCCACCGATAGTGAAGGACGTCCAGGACCAAACTGTGTCCCTGATACTGCAGAAGTCTCCGAGTGGAGTAACAGTGCAGTACAGAGTAGAGTACAAGGAGGTAAAAGCAGATTCTGGTGCTGAGGAGAAGGAACAATGGCTTTTCATAAACACAGCTGATGAAGACTTTACTCTGACTGGATTGGAATCCGGAAAGCAGTATTTGATCCGCTACAGGACAGTGGATAAAGTGGGAGTGAGTGAAGCCAGTGATACTGTCCGCTCCATATCGTCTGCAGTAATTTCACTCATCGTAGTTCTCAAAGTGGGAGAGTTATCATCCTCTGACTTGAACATGGTAAAACTTGTTGATTTCACTCTAGTGTGCTTTATATTGTGGTTAGCACAAGATGTGACTGTGGGTGGGAAAGGAGGTGCTCCATTCTCCTTTAAGAGCTTTTCCAGCAGCATTAAGAAGATCAGCATTACTTGCAGCAAGATGACACTGAACACAATCGAGGTGACTTTCAACACTGGCCAGGCGATGACAGTTGGTAATGTACCAGGATCTAATAAACATACACTTGAACTTAATGAAAATGATAAAATTGAAGCTGCAAAACTGTGGCCAAATAGTCAAAATAACAGATGTGCGGGTTTGGAATTTGTGGTTGCAAAAAAGCCATTTTCTGTTAAGTGTAATCAACTGGGTGAACCTGTGAGTGTTGATGTGAAGTCTGGAAAGTGTTATGGCTTTATGGGGAGAAGTGGAAGTGAAATTGATGCTCTGGGTTTCTACTTTGTTTAGGCTCTAGCTATCTGTTGCTAATAGTCTCCAAATATCTGAACATCTAAAAAAATGACATCTAAACAGCAATCATATACTCATATACATCAGGGTTATTCAATATGATTGGACATGATTGGTTATGATTGAAATATCAGATTTGAATTAATCAGTTGTGTGTCAATCAGACAA

Function

NR:

description
novel protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000310_00003244_00012743.mRNA True 2484 mRNA 0.43 5 3244 12914

Neighbor

gene id symbol gene type direction distance location
CI01000310_00138858_00147748 NA coding downstream 125633 138547 ~ 147755 (+)
CI01000310_00215248_00279025 SNTG2 coding downstream 202334 215248 ~ 279648 (+)
CI01000310_00298547_00317035 NA coding downstream 285633 298547 ~ 318355 (+)
CI01000310_00495852_00504711 NA coding downstream 482938 495852 ~ 504711 (+)
CI01000310_00513998_00524767 HAO1 coding downstream 501084 513998 ~ 525606 (+)
G438818 NA non-coding downstream 9887 22801 ~ 23067 (+)
G438823 NA non-coding downstream 18505 31419 ~ 31954 (+)
G438824 NA non-coding downstream 20103 33017 ~ 33792 (+)
G438825 NA non-coding downstream 22977 35891 ~ 36184 (+)
G438828 NA non-coding downstream 29481 42395 ~ 43534 (+)
CI01000310_00648731_00650082 NAPB other downstream 635652 648566 ~ 650159 (+)
G439115 NA other downstream 637044 651976 ~ 653356 (+)
CI01000310_01207513_01226750 CDC5L other downstream 1209092 1207057 ~ 1227194 (+)
CI01000310_01508712_01511125 FAM167A other downstream 1488972 1508341 ~ 1513341 (+)
G439845 NA other downstream 1898687 1911601 ~ 1912417 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_029650 CR788316.4 coding NC_007115.7 CM002888.2 72500840 ~ 72513569 (-)