CI01000310_00032999_00038804


Basic Information

Item Value
gene id CI01000310_00032999_00038804
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000310
NCBI id null
chromosome length 5141163
location 32950 ~ 39130 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000310_00032999_00038804.mRNA
ACTCTCACAACGCACCAGGTACCAAACATTTCAAGTCATTTTAATTCATTTTTATTTAGGTGTAAATTATTGTCCATACCAGATATTAGTATTCTTTATTAGATTTGATATTATATATTTGATTAGATTTAATATATGATTTAGGACATTATATATGATTGTATAGAATCTGTCAAGATGGCTTTGAGAAATGAAAAAGCAATATTTTGTTGTTCGGCGGTAAAGATCCTCCTAAGGTTTGTTTAAGTTTATTTATTCCATTATTTAATCATTGTTTAAATTGTTCTTTTTCTTGGGTGTGTTATAAATGAACTAATGTTGACGTTATGTTCCTGATGTTCATTGCTGATGCGATAGAGAGCACTGCTTTTACAATGAGTGTCAATGAGAAGAGAGAGGAGGAGGATGCTGTTCAGACAAACTTAGCAGCATCTTCAATACCCTGTCTTGTGTCTATGAAGAGTACTAAGTCCATTAGCTGTCCCACTAATATTGGTGTTGAAGTAGCGACCTCTGACCTGGACAAGCAGCATGTGAAAGAAGCATCCCTGCAGACACACACACTGCTTAACAAGACTAAAGACCCGCAGCGCGATTTTCACCAACCAGTGAATGATGTCCTTCAGAGAGTCAAAGACCGACACAAAACCAGCATGAAGAACAAGTATGAGAGCTTATTTGAGGGAATCAATCTAGAAGAGACTCAACCCCTCCTGAACAGGATCTACACACAGCTCTACATCATAGAGGGAGAGAGTGAAGGGGTGAATGAAGAACATGAAGTTTTACAGATGGAGAAAACAGCCAGAACACAAGACACTCCAATCTACTGCAATGACATCTTTAAACCCTTACATCAACCAGGATGTGAGGAGAAAGACAAAATCAAGACTGTTCTTACTAAAGGCATCGCTGGAATTGGAAAAACCGTCTCTGTGCAGAAGTTCATTCTGGACTGGACCGAGGGAAAAGCCAATCAGGATGTAGATTTTATGTGTGTGCTTCCATTTCGAGAGCTGAACTTGATTAAAGATCACCAGTACAGTCTTCACAGACTTCTGCTGGACTTTCATTCTGAACTTCAAGATTTGGACTTAAAGATTTATGAGGAATGTAAAGTTGTGTTCATCTTTGATGGTCTGGATGAAAGCAGAATTACACTGATGTTTTCAGATGATGAGAAAGTTTGTGATGTGAATGAGTCTTCATCAGTGGGTGTGTTGATGTCAAACCTTATCAGAGGAGAGCTGCTTCCCTCTGCTCTCATCTGGATCACCTCCAGACCAGCAGCAGCCAATCAGATCCCCTCAAAATACATCAACCGTGTGACAGAAATTCAGGGATTCAATGAGCCTCAGAAGGAGGAATATTTCAGGAAGAGAATCAGTGATGAGAATAAAGCCAGCAGAATCATCTCACACATTAGAAGATCAAGAAGCCTCCACATCATTTGTCACATACCTGTCTTCTGCTGGATTTCAGCCACTGTGCTTCAAAACCTCCTGAAACAAGATGACAGTGCAGAAATCCCTGAAACACTTACTGAAATGTACATCCACTTCCTGCTGACTCAGATCAACATGAGGAATCAGAAGTATGATGAGAGAAAAGCAAAGAAACTCCTGAAGACCAACAGAAAAGTAATTATAAAACTTGCAGAACTGGCTTTCAAACAGCTAATGAAGGGCAATGTGATGTTCTATGAGGAGGACCTGATTGAGAGCGGCATAGACGTCACTGACGCCTCAGTGTACTCTGGGATTTGCACTGAGATCTTTAAGCAGGAATCTGTGATTCAGCAGAGGAAAGTTTACTGCTTCATACATCTGAGCTTTCAGGAGTTTCTAGCTGCTTTCTTTTTGTTTTACTCCCATGTAGTCAAGATTCAGAAATCACTGAAGTCATTTCTAAATATGTTGTTTGGGTCAAAGGAAATCTCTCTGTATGATCTACTAAAAGCAGCAGTTGATAAATCCTTAGAGAGTAAAAATGGACACCTTGATCTTTTCCTGCGGTTCCTGCTGGGCGTCTCAATGGAGTCCAATCAGAGACGCTTACAGGATCTACTGACACACACAGAGAACAGCTCAAAGACCATCAAGAAAATCACACAGTACATAAAAGACAAAATCAAGGATGATGAACATCTCTCAGCTGACAGAACCATCAATCTGTTCCTCTGTCTGCTGGAAATTAAGGATCAAACTCTGTACAGAGAGATTCAGACGTTTGTGAAATCAGAGAATCACTCAGTGAATCGACTCTCTCCGTCTCACTGCTCAACAATCGCCGACTTGCTGCAGATTTCAGAGGAGCCGCTGGATGAGTTTGATCTGAAGAAATACAACACATCCGATGAAGGTAGAAGGAGACTGATACCAGCTGTAGTGAACTGCAGAAAAGCTCTACTCGCTGACTGTAATCTCACTGATCAGTGCTGTGAAAGTTTGTCTTCATCTCTACAATCCTCAAACTCACTGAGAGAGCTGGACCTGAGTAACAATGCCCTGCTGGTTTCAGGAGTGAAGTCTCTCTCTAATGGACTGAAGAGTTCACACTGCCATCTTAACATACTGAGATTATCTGGCTGTATGGTGACAGAGGAAGGCTGTTGTTATCTGGCTTCAGCTCTGAATTCAAACCCTTCACATCTGAGAGAGCTGGATCTGAGCTACAATCACCCAGGACAATCATTAGTCAAGCTGCTCTCTGATCCAAACTACAGACTGGACAAACTCAAGTATGATTAACATTAACAATCATCCTGTCATGTGTCTTTGTACATATGTGCACAATAAA
>TU503654
AACCCCTCCTGAACAGGATCTACACACAGCTCTACATCATAGAGGGAGAGAGTGAAGGGGTGAATGAAGAACATGAAGTTTTACAGATGGAGAAAACAGCCAGAACACAAGACACTCCAATCTACTGCAATGACATCTTTAAACCCTTACATCAACCAGGATGTGAGGAGAAAGACAAAATCAAGACTGTTCTTACTAAAGGCATCGCTGGAATTGGAAAAACCGTCTCTGTGCAGAAGTTCATTCTGGACTGGACCGAGGGAAAAGCCA

Function

NR:

description
hypothetical protein cypCar_00039170

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000310_00032999_00038804.mRNA False 2799 mRNA 0.41 5 32950 39130
TU503654 True 270 lncRNA 0.44 1 35884 36153

Neighbor

gene id symbol gene type direction distance location
CI01000310_00083324_00113068 NA coding upstream 43942 81228 ~ 113106 (-)
CI01000310_00151988_00156136 TMEM151B, TMEM151BB coding upstream 111484 150614 ~ 156136 (-)
CI01000310_00369180_00401704 NA coding upstream 329430 368560 ~ 401862 (-)
CI01000310_00415541_00454442 PLCB1 coding upstream 376151 415281 ~ 454442 (-)
CI01000310_00593564_00595487 BMP2, BMP2A coding upstream 554396 593526 ~ 595937 (-)
G438841 NA non-coding upstream 8734 47864 ~ 48170 (-)
G438845 NA non-coding upstream 15340 54470 ~ 54813 (-)
G438848 NA non-coding upstream 22568 61698 ~ 61969 (-)
G438850 NA non-coding upstream 23235 62365 ~ 62776 (-)
G438859 NA non-coding upstream 38632 77762 ~ 78638 (-)
G439012 NA other upstream 293125 332255 ~ 334054 (-)
G439398 NA other upstream 900005 939135 ~ 941564 (-)
G439473 NA other upstream 1075230 1114360 ~ 1114833 (-)
G441306 NA other upstream 2787654 2826784 ~ 2827204 (-)
CI01000310_03135568_03137756 NA other upstream 3095502 3134632 ~ 3137756 (-)

Expression


Co-expression Network