CI01000310_00298547_00317035


Basic Information

Item Value
gene id CI01000310_00298547_00317035
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000310
NCBI id null
chromosome length 5141163
location 298547 ~ 318355 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000310_00298547_00317035.mRNA
GTTCGAGAAGTCAGTAACAAAATCATGCGTGGCTCCAGCATGTCCATCCTGGAGGATAACGTTTACTCCCAGATGCTGGTGGACTGGGGCCAATACATCGACCATGATATCTCCTTCACACCTCAGAGCTCCAGCCAAACCGCGTTCTCGGAGGGACGGGACTGTCTGCACACCTGCACCAATGCCAACCCCTGCTTCCCAATGCAGATTCCCAAGGATGATAAACTTTCCAGAAACAAAAGCTGTCTTCCGTTTTTCCGTTCTTCACCCGCCTGCCTAAACGGCCAGAGAGACGCACAACACGTTCGACAACAGATGAATTCAGTCACGTCCTTCATAGACGCATCAACCGTCTACGGCCATTCGAAAGACCTCGAGAAAATCCTCCGAAACCTCTCTGGCTCTGAAGGTCTCCTGGCTGTCAATAGTAAATACACGGATAAGGGCCTGCCGTACTTGCCCTTCGTCTCTGTCCAGCCATCCGCGTGCCTCCAGGATCCCGGGTCAGAGCGGGTCGAGTGTTTCGCGGCAGGTGACAGCAGGGTAAACGAGATCCTGCCCCTGTCTGTCCTCCATACGCTCTGGGTGAGAGAACACAACCGGCTGGCCAAACACCTGACACGACTTAACCCTCACTGGGGGTCAGAGGTCATCTACCAGGAGACTCGCAAAATCATTGGAGCGCTGCATCAGATCATAACCATGAGGGACTATGTTCCAAAAATCATTGGACGGGAAGCGTTTGATGAGTATATCGGACCGTACGAGGGCTATAACGACTCTGTGAATCCTTCTGTGTCAAACGTGTTCGCCACGGCTGCGTTCCGCTTCGGTCATGTGACCATCTCCCCGGTGCTCCGGAGACTGAACGAGAGCTTCCAGGAACACGAGCGCTTCTCTTCTCTGAATCTTCATCAGACCTTCTTCAGCCCTTGGAGACTGATAAAAGAAGGTGGACTGGATCCGGTCCTGCGGGGTCTTGTGGGCCGGCTGGCTGCCCTGCAGGACCAGGACCATCTAATGACAGAAGAACTGACGGAAAGACTCGTGGTTCTCAACATCCCAGAGACTTTAGATCTGGCAGCTCTGAACCTGCAGCGGGGACGAGATCACGGCTTACCAGGTTACAATGACTGGAGGGTTTTCTGTGGATTTGACAGAGTTGAAACCAGATCAGATCTCGCAGAGGTGATCGGCAATGATGTTTTGGTAGAGAAAGTAATGGATTTGTATGGACATCCAAACAACATTGATGTGTGGCTGGGAGGAGTGCTGGAGCGTACGCTGTCTGGAGCCAGGACCGGACCACTCTTCGCATGCTTGATCGGAAAACAGATGAAGACGCTGAGGGAAGGTGACAGATTCTGGTGGGAACATCCCGGTGTCTTTTCCCCAAAACAAAGACAGGAACTACAGAGGCACTCTCTGTCTCGTGTCATCTGTGACAACAGTGGTGTGACGGAGGTTCCTCTTGATCCGTTCAGAGTAGAAACTTACCCAGAGGACTTTCTCTTCTGTGGGAACATCCCATCACTGGATCTGGAGGAATGGAAAGAGCAACCTGATGACGGTACGTATGTGACATGCTGCCTTCCAGCTTTATTTAGATTGAGATAGTAGGTTAAAATTTACATATACACTACGTTTTTTTTTTAGTTTTTTTTTTACGTATTATATAATTTTTATATCATTCATATTATATTTTATCTTATATAACTATATATTTTTATATTATTTATATAAAACAAATATATATTTTATTCCAGTGATCAAAGCTGAATTTTCAGCATCATTACTCCAGTCTTCAGTGTCACATGATCCTTTAGAAATCAATTTAATTGTAATTATAAAATAAAATATAAATATAAAATTTTAAAATAAATATAACTTTATTATATATATATATATATATATATATATATATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTCTTCAGTGTCACATGATCCTTTAGAAATCAATTTAATTATAATATAATTATAAAATAAATATAAAAATATAAATGTAAAATTATAAAATAAATATAATTTTAATATATATTATATAAAATTCATAATATATTTTATCTTATATAATTATATATTTTTATATTATTTTTATAAAACAATTATATTTTTATTCCTGTGATCAAAGCTCATTACTCCAGTCTTCAGTGTCACATGATCCTTCAGAAATCAATTTAATGCATCCTTGTTAAATAAAAGTAATAATTTCTTAAAGAAAAATCTTACTGAGCCCAAACTTTTGAACGGTGGTGTATTTGCAAAGAAAAAAGTATATTTCACATCATGTAACTGGTAGTTTTTCACCATCTTTTCCTTCACTGGTTCATTTTAAATAGTCCTGAGGTGTAACGAATGATTCCATGTAGCCTCTCAATTAATTTAACTCATAAACGCTGCACGCATAATAATCATAAAAGAATTAGAAATAGTTTTGCATTTCAAAATAACTTTAAATGAAGTGAAGCATGTCACACCGCAGGACACTGCTTGAAGTTTCACGTCAGCCTCCTTTATGTGTCCATGTGCAAACGAACGCAGCTAAACACTGCTGTGGAAATTCATGAATACCAAAGAGGCTCTAATTTGAGGAATTACACAGTCTCAATGAGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000310_00298547_00317035.mRNA True 2937 mRNA 0.37 6 298547 318355

Neighbor

gene id symbol gene type direction distance location
CI01000310_00215248_00279025 SNTG2 coding upstream 18899 215248 ~ 279648 (+)
CI01000310_00138858_00147748 NA coding upstream 150792 138547 ~ 147755 (+)
CI01000310_00003244_00012743 NA coding upstream 285633 3244 ~ 12914 (+)
CI01000310_00495852_00504711 NA coding downstream 177497 495852 ~ 504711 (+)
CI01000310_00513998_00524767 HAO1 coding downstream 195643 513998 ~ 525606 (+)
CI01000310_00629492_00629967 NA coding downstream 311137 629492 ~ 630832 (+)
CI01000310_00648731_00650082 NAPB coding downstream 330376 648566 ~ 650159 (+)
CI01000310_00653504_00679039 NA coding downstream 335149 653504 ~ 679039 (+)
G438913 NA non-coding upstream 67178 229796 ~ 231369 (+)
G438881 NA non-coding upstream 164157 134062 ~ 134390 (+)
G438847 NA non-coding upstream 236573 61585 ~ 61974 (+)
G438834 NA non-coding upstream 245088 53192 ~ 53459 (+)
G439052 NA non-coding downstream 98261 416616 ~ 419017 (+)
G439054 NA non-coding downstream 108357 426712 ~ 490523 (+)
G439072 NA non-coding downstream 180418 498773 ~ 500118 (+)
G439111 NA non-coding downstream 292081 610436 ~ 610741 (+)
G439135 NA non-coding downstream 381260 699615 ~ 699921 (+)
G439115 NA other downstream 331603 651976 ~ 653356 (+)
CI01000310_01207513_01226750 CDC5L other downstream 903651 1207057 ~ 1227194 (+)
CI01000310_01508712_01511125 FAM167A other downstream 1183531 1508341 ~ 1513341 (+)
G439845 NA other downstream 1593246 1911601 ~ 1912417 (+)

Expression


Co-expression Network