CI01000310_00631552_00635392 (CRLS1)


Basic Information

Item Value
gene id CI01000310_00631552_00635392
gene name CRLS1
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000310
NCBI id null
chromosome length 5141163
location 631284 ~ 635392 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000310_00631552_00635392.mRNA
ATGTTTTTGGCAGCTTGTTCAAAGAGCTGGTTCAGCTGTGCTAAAGGACACATACACAGACTGAGCGCCAGCACTGCTGCCACCTGCCACTCCGGCTGCAACTACAGAAGACCTGCGAACGTACAGCTGAAAAACACTAAAGCAGAAGTCAGATGGCTCCAGAGGCTGAAAACCAGATGCTGGACCAACTCACATCTGGCCTGTGACTCCTATGGACCACAAGTGGACCTTTATAGAGAAGTCAGTCAGAGAGCAGACCCTCCCACCTCAGTTATATGTAGATCTAAACTACAGAAGCTTCACCACAGGCTTCATCTGCCAGTGTCGAGCAGTAGTTTTAGTGCTGCTGTCAGTCTGTATGGTTCAAATGGGTTTTGTACTGATGCATCTAGAAAGCCAGTTTTGGAAGAGAAATGTTCTAAACAGGATTCAAGGGAAAAGGAGGAAGTTCAAGGACAAGGAGCCTCTTCCCCTCCAGCTAATGAGGGACACTTCCAGTTTAAAGAACTGTATGAGAATCCATGGACGATCCCTAATTACCTCTGTATAGCCCGGATCGTTCTGTCTCCTCTCCTGGGATACTTAATCATTGAGCAGCACTTCCACGCCTCTCTGGGGCTTTTTGTACTGGCCGGAGCAACAGACTTGTTGGACGGCTACATCGCTCGTAACTGGCCCAATCAGAAGTCGGCTCTGGGCAGTGCTCTGGATCCATTGGCTGATAAGATTCTCATCAGCGTTCTTTACGTCAGTCTGACATATGCACAACTCATCCCAGCTCCACTGACAGCACTGATCATATCCAGAGATGTAGCACTGATCGCTGCGGTTTTCTATGTGCGCTACAAAACTGTTCCTCCTCCAGTAACACTCAGTAAATTCTTCAACCCCTGTTACACCACTGCCCGGCTCAAACCAACACTCATCAGCAAGATCAACACGGCAGTGCAGTTGTTTCTGGTGGCGGCGTCTCTGGCGGCGCCGGTGTTTCACTACACAGACAGTGTTTTTCTGCAGTCACTGTGGTACATTACCGCACTGACGACCACAGTATCTGCTTACAGCTACTATCATTACGGTAAAAAGACCGTTGAGGTTCTGAACAAAACACAGTAGTCGTACAGTCATCGGCACAGCTGGGATTTGACCTTTGACACATACATTTGGGAATCCTTGAAATAATCAGTGATTGTGCATAATGGAAATGAATGCCACGGTCTTACTCTTGTAACTGAGGCACTTTAGTCTGTATAAAGTCAAATATTATTTTGATTACAATATTGAATTCATGTGGTGTCACTTCTGATCAAGATATGATTTTCATCTCCACAGGAAACATTTTTAAAATCATTTTAATGAACTGTGGGTCAGTTTTGAAAATAAA

Function

symbol description
crls1 Predicted to enable cardiolipin synthase activity. Predicted to be involved in cardiolipin biosynthetic process. Predicted to act upstream of or within phospholipid biosynthetic process. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in mitochondrion. Orthologous to human CRLS1 (cardiolipin synthase 1).

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000310_00631552_00635392.mRNA True 1384 mRNA 0.46 7 631284 635392

Neighbor

gene id symbol gene type direction distance location
CI01000310_00597640_00601450 GDF3 coding downstream 29709 597505 ~ 601575 (-)
CI01000310_00593564_00595487 BMP2, BMP2A coding downstream 35347 593526 ~ 595937 (-)
CI01000310_00415541_00454442 PLCB1 coding downstream 176842 415281 ~ 454442 (-)
CI01000310_00369180_00401704 NA coding downstream 229422 368560 ~ 401862 (-)
CI01000310_00151988_00156136 TMEM151B, TMEM151BB coding downstream 475148 150614 ~ 156136 (-)
CI01000310_00637385_00645599 MCM8 coding upstream 1593 636985 ~ 645599 (-)
CI01000310_00762106_00777075 KCNK10B, KCNK10 coding upstream 126447 761839 ~ 777075 (-)
CI01000310_01278443_01278823 NA coding upstream 642557 1277949 ~ 1279008 (-)
CI01000310_01288093_01294540 NA coding upstream 652658 1288050 ~ 1294540 (-)
CI01000310_01301239_01302430 NA coding upstream 665170 1300562 ~ 1302604 (-)
G439244 NA non-coding downstream 8677 622406 ~ 622607 (-)
G439240 NA non-coding downstream 15528 615498 ~ 615756 (-)
G439187 NA non-coding downstream 105605 478585 ~ 525679 (-)
G439197 NA non-coding downstream 121784 508793 ~ 509500 (-)
G438947 NA non-coding downstream 493666 137274 ~ 137618 (-)
G439248 NA non-coding upstream 11972 647364 ~ 648163 (-)
G439250 NA non-coding upstream 13173 648565 ~ 649861 (-)
G439258 NA non-coding upstream 64201 699593 ~ 699921 (-)
G439267 NA non-coding upstream 94970 730362 ~ 732065 (-)
G439278 NA non-coding upstream 120958 756350 ~ 756572 (-)
G439012 NA other downstream 297230 332255 ~ 334054 (-)
G439398 NA other upstream 303743 939135 ~ 941564 (-)
G439473 NA other upstream 478968 1114360 ~ 1114833 (-)
G441306 NA other upstream 2191392 2826784 ~ 2827204 (-)
CI01000310_03135568_03137756 NA other upstream 2499240 3134632 ~ 3137756 (-)
CI01000310_03715435_03742324 NA other upstream 3102700 3715028 ~ 3742531 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_011194 crls1 coding NC_007128.7 CM002901.2 4368859 ~ 4386084 (+)