CI01000310_00691123_00696889


Basic Information

Item Value
gene id CI01000310_00691123_00696889
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000310
NCBI id null
chromosome length 5141163
location 691123 ~ 697281 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000310_00691123_00696889.mRNA
AGTGAAAAGAGTTGACAAGATCAGATCAGTGACACCCCGTCTGACCTGCACTGACTCCGACTGTCAGACCCTCATCAGACAGAGCGTCAGAGACAGACACAAAACCAGCATGAAGAACAAGTATGAGACATTATTTGAGGGAATCAAACTAGAAGGGAATCAAACCCTCCTGAACAGGATCTACACACAGCTCTACATCATAGAGGGAGAGAGTGAAGGGGTGAATGAAGAACATGAGGTTTTACAGATGGAGAAAACAGCCAGAACACAAGACACTCCAATCTACTGCAATGACATCTTTAAACACTTACATCAACCAGGATGTGAGGAGAAAGACAAAATCAAGACTGTTCTTACTAAAGGCATTGCTGGAATTGGAAAAACAGTCTCTGTGCAGAAGTTCATTCTGGACTGGGCCGAGGGAAAAGCCAATCAGGATGTAGATTTCATGTTTGTGCTTCCATTTAGAGAGCTGAACTTGATTAAAGATCACCAGTACAGTCTTCACAGACTTCTGCTGGACTTTCATCCTGAACTTCAAGATCTGGACTCAAAGATTTATAAGGTGTGTAAAGTTGTGTTCATCTTTGATGGTCTGGATGAAAGCAGAATCACACTGATGTTTTCAGATGATGTGAATGAGTCTCCATCAGTTTGTGAAGTGAATGAGTCTTCATCAGTTTGTGATGTGAATGAGTCTTCATCAGTTTGTGAAGTGAATGAGTCTTCATCAGTTTGTGAAGTGAATGAGTCTTCATCAGTTTGTGATGTGAATGAGTCTTCATCAGTTTGTGATGTGAATGAGTCTTCATCAGTTTGTGAGGTGAATGAGTCTTCATCAGTTTGTGAGGTGAATGAGTCTTCATCAGTTTCTGATGTGACTGAGACTTCATCAGTGGGTGTGTTGATGTCAAACCTCATCAGAGGAAAGCTGCTTCCCTCTGCTCTTATCTGGATCACCTCTAGACCAGCAGCAGCCAATCAGATCCCCTCAAAATACATCAACCGTGTGACAGAAATTCAGGGATTCAATGAGCCTCAGAAGGAGGAATATTTCAGGAAGAGAATCAGTGATGAGCACCAAGCCAGCAGAATCATCTCACACATCAGAAGAGCAAGAAGCCTCCACATTATGTGTCACATACCTGTCTTCTGCTGGATCTCAGCCACTGTGCTTCAAAACCTCCTGAAACAAGATGACAGTGCAGAAATCCCTCAAACTCTGACTGAAATGTATATACACTTCCTGCTGACTCAGATCAACATGAGGAATCAGAAGTATGATGAGAGAGATCCAGAGAAACTCCTGAAGTCCAACAGAGACGTGATTATGAAACTTGCTGAACTGGCTTTCACACAGCTGATGAAGGGCAATGTGATCTTCTATGAGGAGGACCTGATTGAGAGCGGCATGGACGTCACTGACGTCTCAGTGTATTCTGGGATTTGCACTGAGATCTTTAAGGAGGAATCTATGATTCATCAGAGGAAAGTCTATAGCTTCATTCATCTGAGCTTTCAGGAGTTTCTAGCTTCTTTATATCAGCTTTACTGCCATGTTGTCTATAATGAGAAGTCATCGAAGTTCTTTCTGGGTATGCGGCCCAGGTTCAAAGAAATCTCTCTGTATGAGCTACTAACATTAGCAGCTGATAAATCCCTACAGAGTGAAAATGGACACTTAGATCTTTTCCTGCGGTTCCTGCTGGGCGTTTCACTGGAGTCCAACCAGAGACTTTTACAGGATCTACTGACAGACACAGTGAACAGCTCAGAGACCATCATGTGTATCACACAGTACATTAAAGACAAAATCGAGGGTGATTATGAACGTCTCTCAGCTGACAGATGTATCAATCTGTTCCTCTGTCTGCTGGAAATGAAAGATCAGACTCTGTTCAGAGAGATTCAGGAGTTTGTGAAATCAGAGAATCACTCATTGAATCGACTCTCTCCGTCTCACTGCTCAACAATCGCCTACATGCTTCAGATATCAGAGGAGGTACTGGATGAGTTTGATCTGAAGAAATACAACACATCAGATGAGGGTAGAAGGAGATTGATACCAGCTGTGCTGAACTGCAGAAAAGCTCTACTCACTGACTGTAATCTCAATGATCAGTGCTTTGAAAGTTTGTCTTCATGTCTACAGTCATCAAACTCACTGAGAGAGATGGACCTAAGTCACAATGACCTGCAGGATTCAAGAGTAAAGCTGCTCTCTGATGGACTGAAGAGTTCACACTGTCAACTCAACATACTGAGACTAACTGACTGTAATCTCACTGATCAGTGCTGTGAAAGTTTGTCTTCATGTCTACAGTCATCAAGCTCACTGAGAGAGCTGGACCTGAGTCACAATGACCTGCAGGATTCAGGAGTAAAGCTGCTCTCTAATGGACTGAAGAGTTCACACTGTCAACTAAACAAACTGAGCTCGGAGTTCAAACCCCTCACACCTGAGAGAGCTGGATCTGAGATACAATCACCCAGGACAATCATTAGTCAAGCTGCTCTCTGATCCAAACTACAGACTGGATAAACTCAAGTATGTTCAACACTCACAATCATTCTGTCATGGGCCCCAAGCACCCACGGAAAAACACGAGTTTTAATCCTTTCAACTTAACCAATAAAAATTGATTGAAGCTTTCAGACACGGCCTTCTTTTTATTTTTATAGTTCATTTAAGACAGTTTCTATTTCGTTAATGTCGAGAGCGCATTATTGTAACGCAAGAGCGCATCCATGTAATTTGTGAGCACAAATCTCTCTGCTCGAACGTGGACGTGCTCAAACTTTGTCCTGTCAGAAATCTTGACGTGCTTTTTCTCTAGAATTATCTTTAATTATTTAATGTTGCCAGAAGATTTCAGTTATGAAATAACAGTTTAACTTGTCACGAAATTACGA

Function

NR:

description
hypothetical protein cypCar_00039170

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000310_00691123_00696889.mRNA False 2913 mRNA 0.42 4 691123 697281

Neighbor

gene id symbol gene type direction distance location
CI01000310_00653504_00679039 NA coding upstream 12084 653504 ~ 679039 (+)
CI01000310_00648731_00650082 NAPB coding upstream 41004 648566 ~ 650159 (+)
CI01000310_00629492_00629967 NA coding upstream 60291 629492 ~ 630832 (+)
CI01000310_00513998_00524767 HAO1 coding upstream 165517 513998 ~ 525606 (+)
CI01000310_00495852_00504711 NA coding upstream 186412 495852 ~ 504711 (+)
CI01000310_00717405_00718485 BDKRB2 coding downstream 20124 717405 ~ 718563 (+)
CI01000310_00721054_00727169 BDKRB1 coding downstream 23556 720837 ~ 729312 (+)
CI01000310_00738120_00739067 NA coding downstream 40637 737918 ~ 739815 (+)
CI01000310_00744256_00746991 NA coding downstream 46097 743378 ~ 747105 (+)
CI01000310_00784238_00790497 NA coding downstream 86957 784238 ~ 791969 (+)
G439111 NA non-coding upstream 80382 610436 ~ 610741 (+)
G439072 NA non-coding upstream 191005 498773 ~ 500118 (+)
G439054 NA non-coding upstream 200600 426712 ~ 490523 (+)
G439052 NA non-coding upstream 272106 416616 ~ 419017 (+)
G438913 NA non-coding upstream 459754 229796 ~ 231369 (+)
G439135 NA non-coding downstream 2334 699615 ~ 699921 (+)
G439141 NA non-coding downstream 6367 703648 ~ 748971 (+)
G439134 NA non-coding downstream 18233 715514 ~ 746104 (+)
G439138 NA non-coding downstream 54989 752270 ~ 752679 (+)
G439148 NA non-coding downstream 59058 756339 ~ 756796 (+)
CI01000310_01207513_01226750 CDC5L other downstream 524725 1207057 ~ 1227194 (+)
CI01000310_01508712_01511125 FAM167A other downstream 804605 1508341 ~ 1513341 (+)
G439845 NA other downstream 1214320 1911601 ~ 1912417 (+)
G440505 NA other downstream 2402136 3099417 ~ 3136328 (+)

Expression


Co-expression Network