CI01000310_01257447_01269508


Basic Information

Item Value
gene id CI01000310_01257447_01269508
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000310
NCBI id null
chromosome length 5141163
location 1257327 ~ 1270033 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000310_01257447_01269508.mRNA
ATATTTAAAGCCTGACTGTAAACCAAACATTGACACTAACATTATAGCTACCGATTATTTGCAAAAGTCCGAGTGACTGTGCACGAGACTGACCGCATATTGCTTCCACAGCGATCTGGAATGAGAATCAGACGGAGGCGCATTGCTTTTACAGATAACCAGACTCTTGTGTCCTGTCTTCAGCAGCGAGCTATAACTCAAAGCAGCGATGACCTGACAAGCCCCGTATCCCGCCTGTGGAAGCACATCGGCTGTGACAGGCCGCACCTGTGGGATTCTGCTCCGGAAAAGGCTCATAAAGGACGGGCCGAGTGTGGCAGTGTCGCCAGGGAACCGCATCCAGATTTCACATGCGCGAGTCTGTTTGACTCGTCTCTACCTGACGGAGAGCGCCGAGGGTCACAGCGGGGTCACAACCTCAGATATCCTTGCTCAAAGAAAGGCAACAGCTCTCAAAGGGCTCCCTGTGTTTATGAGGGAAAAGTCAGAAAACGTCCTGAAGACCTGCCTGGTCTCCAGGTTCAGACCTGGATCATCCAGGCAGGCCTCTGGCCTTGGCAGTGGGTGGCAGGCCACGGCCGCCCTCCGCACCTCTACCGGGGCGAAACCGAGCCGATGGGGTCCAAGAAAAACTCGAGGAAAAAATATCTGCAACATGGGCAGAGGAAGCATCTGTGTGGAGAGAGAGGCTTTCTGATGAAATATCGCCTGCTGACAGTACAAGAAGGAAGAGGCCATGCGGTTTCAGAGCCCTCGTACAGAAGCACCGCTGTAAAAACGCATTCCAGTAGCCCAGCAACTGACCCTCGCTGATTTTATTGCCTGTATATATTACGGGCTCTGCAGAAATCCAGAGCGTATGGATCAGAAATCTGGGATCGGTCGATACGGAAGGCTGGCAGGGGTCTGGAAGGCTTTATTGGATGCACGCTCGTGTCCTTCACTTCTGTGAATGGTCACCACATGTTGGTGGTTATTTGTGCAAGCTGTTAAATTTGCATTGGTAGCATGATTTGAATTAATGATTTTCTCCAACTGTGTGAGCCTGACACAACATCTAAAGAAAAATAACAGTTTGGATTTTATATTCATGTGCAAGATTATTTGCTCTTGGATTGCAGTTTACACAAAAGGTCACACAAACACATTATTTTCTTTATTTATTTACAATGGATCATTACGGACAGCCCACTGTCATATTAGTTAAAAGAAAAGTTAAGCCCAAAATAAAAAACTATGTCATGATTTACTCACTGTCATGTTGTCTGAAGAGTGGTTAAACAATACGGGTTTATCAATGGCCGATACCAACTATAAAGTATATAATATATTGTATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000310_01257447_01269508.mRNA True 1338 mRNA 0.47 3 1257327 1270033

Neighbor

gene id symbol gene type direction distance location
CI01000310_01207513_01226750 CDC5L coding upstream 30155 1207057 ~ 1227194 (+)
CI01000310_01196439_01199290 NA coding upstream 57950 1195700 ~ 1199377 (+)
CI01000310_01103452_01164843 NA coding upstream 92353 1101821 ~ 1164974 (+)
CI01000310_00861939_01046631 KLHL29 coding upstream 210696 861939 ~ 1046631 (+)
CI01000310_00784238_00790497 NA coding upstream 465433 784238 ~ 791969 (+)
CI01000310_01394296_01394727 NA coding downstream 123056 1393089 ~ 1394908 (+)
CI01000310_01411744_01412226 NA coding downstream 141711 1411744 ~ 1412467 (+)
CI01000310_01414325_01452698 RUNX2, RUNX2A coding downstream 144292 1414325 ~ 1452698 (+)
CI01000310_01508712_01511125 FAM167A coding downstream 238679 1508341 ~ 1513341 (+)
CI01000310_01513690_01517791 NA coding downstream 243657 1513690 ~ 1518229 (+)
G439541 NA non-coding upstream 59257 1197604 ~ 1198070 (+)
G439519 NA non-coding upstream 94171 1162939 ~ 1163156 (+)
G439511 NA non-coding upstream 101564 1155294 ~ 1155763 (+)
G439507 NA non-coding upstream 106307 1150740 ~ 1151020 (+)
G439505 NA non-coding upstream 108371 1148611 ~ 1148956 (+)
G439628 NA non-coding downstream 87865 1357898 ~ 1367503 (+)
G439631 NA non-coding downstream 95598 1365631 ~ 1366429 (+)
G439657 NA non-coding downstream 137674 1407707 ~ 1410605 (+)
G439679 NA non-coding downstream 252705 1522738 ~ 1523826 (+)
G439704 NA non-coding downstream 292288 1562321 ~ 1562554 (+)
G439115 NA other upstream 566135 651976 ~ 653356 (+)
CI01000310_00648731_00650082 NAPB other upstream 607774 648566 ~ 650159 (+)
G439845 NA other downstream 641568 1911601 ~ 1912417 (+)
G440505 NA other downstream 1829384 3099417 ~ 3136328 (+)

Expression


Co-expression Network