CI01000310_01411744_01412226


Basic Information

Item Value
gene id CI01000310_01411744_01412226
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000310
NCBI id null
chromosome length 5141163
location 1411744 ~ 1412467 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000310_01411744_01412226.mRNA
ATGAAGTGGCAAATGCGATTCAGAGCCATTGGATGTTTTATTTCCCTCCTACATCCTCGCTGCGCCGCCACACACAGCTCCCAGCAGCGCCTGCCTGCGTCTGCACAAGACCTGCAATCATGCAAAATCCATTTCTCTCACACCAAAATGTGTAGATTAAAGGCTCTTGGACATGTACTTGGACAGGAAGGAGGAGGAGAAATGGCTCGCACGTTCAAATCTCCATCATCTCTGTGTGTGCAAGTTTCCACAGAGTCAGACTTCATGTCGAGTGCTGACATCACTCTTCCTACGGTCTTTCAAACAGCCAAGGTTTTACAAACAATACACATGGGGGAAAGTCAGGCTAGACACAAGAGTGGGGATGTGATTTTTTCCAGAATAAAACACAGAATTGACTGTGAAGGAAGAACAGAGTATGAAACCTCAACTACCACAGGCTCACAACTGGAGTCTAGAATAAGAAAATGGGATCAGCACTGAGAATTTTCCATCTAATTATAATTTTGCACAAATAATGTGCATATTTAATTAGCATTTCGAGATAAGCAAGCTCATTTTGGCTCAGTATATTCTTTAATGCGTCTGTGAGACTTAAAGATGCTTAAGTAACTTAACATGTCTGATGCTCTGTCAAAAAGCTATTTACTATAAGCATAACTGTAACTGCAACTAACAACTTTTACTAGATTTCAGAGTATCCAAACAGTTAAAACTATATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000310_01411744_01412226.mRNA True 724 mRNA 0.41 1 1411744 1412467

Neighbor

gene id symbol gene type direction distance location
CI01000310_01394296_01394727 NA coding upstream 16836 1393089 ~ 1394908 (+)
CI01000310_01257447_01269508 NA coding upstream 141711 1257327 ~ 1270033 (+)
CI01000310_01207513_01226750 CDC5L coding upstream 184572 1207057 ~ 1227194 (+)
CI01000310_01196439_01199290 NA coding upstream 212367 1195700 ~ 1199377 (+)
CI01000310_01103452_01164843 NA coding upstream 246770 1101821 ~ 1164974 (+)
CI01000310_01414325_01452698 RUNX2, RUNX2A coding downstream 1858 1414325 ~ 1452698 (+)
CI01000310_01508712_01511125 FAM167A coding downstream 96245 1508341 ~ 1513341 (+)
CI01000310_01513690_01517791 NA coding downstream 101223 1513690 ~ 1518229 (+)
CI01000310_01564875_01571307 TDH coding downstream 152408 1564875 ~ 1572028 (+)
CI01000310_01588365_01597469 NA coding downstream 174025 1586492 ~ 1597486 (+)
G439657 NA non-coding upstream 1139 1407707 ~ 1410605 (+)
G439628 NA non-coding upstream 44241 1357898 ~ 1367503 (+)
G439631 NA non-coding upstream 45315 1365631 ~ 1366429 (+)
G439565 NA non-coding upstream 149983 1261346 ~ 1261761 (+)
G439541 NA non-coding upstream 213674 1197604 ~ 1198070 (+)
G439679 NA non-coding downstream 110271 1522738 ~ 1523826 (+)
G439704 NA non-coding downstream 149854 1562321 ~ 1562554 (+)
G439721 NA non-coding downstream 191430 1603897 ~ 1604107 (+)
G439723 NA non-coding downstream 192384 1604851 ~ 1605069 (+)
G439741 NA non-coding downstream 238545 1651012 ~ 1651387 (+)
G439115 NA other upstream 720552 651976 ~ 653356 (+)
CI01000310_00648731_00650082 NAPB other upstream 762191 648566 ~ 650159 (+)
G439845 NA other downstream 499134 1911601 ~ 1912417 (+)
G440505 NA other downstream 1686950 3099417 ~ 3136328 (+)

Expression


Co-expression Network