CI01000310_01508712_01511125 (FAM167A)


Basic Information

Item Value
gene id CI01000310_01508712_01511125
gene name FAM167A
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000310
NCBI id null
chromosome length 5141163
location 1508341 ~ 1513341 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000310_01508712_01511125.mRNA
ATGGCAATGTCACATGCAGCTAAGCCCTTAAAAAGTTCAGAAAGCCTTTCTGCATCACAGGATGACCACCTTTCCAGTTTGAAGGCTTTGACTGAGAAGCTGAAACTGGAGACCAGCAAGCCGTCTTACCTGGACTGGAGAGCCCAGCTGGAGGCGATGCTGGCCCAGAGCCACAGAGTCTCAGATGCGTTAGCCGCACCGGGTGACACGGAGAAGCAAAAAACATCAGGTCCTCTTAAGTGGACGAAGCCGTCACTGGGCGCTGGTGTGATCCATGAAGGGAGGCAACCATCAGTGAACAGACTGGGATTTGGAAGTATAGACAGAGCGTTGGAGTGGCTCAGGAAAGAGCTGGCAGAGATGCGTTTACAGGACCAGCAGCTCGCACGTCAGCTAATGCACCTGCGCAGTGACATTAACAAACAGAGAATCGTGCAGACGTGTAACCAACATCGCAAGATGCTGAACGATGCCACATTTGAGCTGGAGGAGCGAGACGATATGTCAGATTTATGTGACGTCCCCATGTCTCCTGGATTAGGCCTCTCCTCGACACTCAAGGTCATCGGGGTCACCAAGATGAACATCAACTCTCGGCGGTTTTCCCTGTGCTAA

Function

symbol description
fam167a Orthologous to human FAM167A (family with sequence similarity 167 member A).

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000310_01508712_01511125.mRNA False 615 mRNA 0.52 2 1508712 1511125

Neighbor

gene id symbol gene type direction distance location
CI01000310_01414325_01452698 RUNX2, RUNX2A coding upstream 56014 1414325 ~ 1452698 (+)
CI01000310_01411744_01412226 NA coding upstream 96245 1411744 ~ 1412467 (+)
CI01000310_01394296_01394727 NA coding upstream 113804 1393089 ~ 1394908 (+)
CI01000310_01257447_01269508 NA coding upstream 238679 1257327 ~ 1270033 (+)
CI01000310_01207513_01226750 CDC5L coding upstream 281540 1207057 ~ 1227194 (+)
CI01000310_01513690_01517791 NA coding downstream 2565 1513690 ~ 1518229 (+)
CI01000310_01564875_01571307 TDH coding downstream 53750 1564875 ~ 1572028 (+)
CI01000310_01588365_01597469 NA coding downstream 75367 1586492 ~ 1597486 (+)
CI01000310_01638700_01644396 FNDC4B coding downstream 127575 1638700 ~ 1644598 (+)
CI01000310_01663192_01666886 NA coding downstream 152067 1663192 ~ 1667160 (+)
G439657 NA non-coding upstream 98107 1407707 ~ 1410605 (+)
G439628 NA non-coding upstream 141209 1357898 ~ 1367503 (+)
G439631 NA non-coding upstream 142283 1365631 ~ 1366429 (+)
G439565 NA non-coding upstream 246951 1261346 ~ 1261761 (+)
G439541 NA non-coding upstream 310642 1197604 ~ 1198070 (+)
G439679 NA non-coding downstream 11613 1522738 ~ 1523826 (+)
G439704 NA non-coding downstream 51196 1562321 ~ 1562554 (+)
G439721 NA non-coding downstream 92772 1603897 ~ 1604107 (+)
G439723 NA non-coding downstream 93726 1604851 ~ 1605069 (+)
G439741 NA non-coding downstream 139887 1651012 ~ 1651387 (+)
G439115 NA other upstream 817520 651976 ~ 653356 (+)
CI01000310_00648731_00650082 NAPB other upstream 859159 648566 ~ 650159 (+)
G439845 NA other downstream 400476 1911601 ~ 1912417 (+)
G440505 NA other downstream 1588292 3099417 ~ 3136328 (+)

Expression


Co-expression Network