CI01000310_01513690_01517791


Basic Information

Item Value
gene id CI01000310_01513690_01517791
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000310
NCBI id null
chromosome length 5141163
location 1513690 ~ 1518229 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000310_01513690_01517791.mRNA
TCACCAGAGGGTAAGGCCTATAGTAAAAAAGTTTTAACACCAGTTCTAACACTAACAGAACTGCTTGTCAACGTAACAAAGCCGTTCACAATGCAAGTGCCGTGGAACTTAAGATTTGGGATAGTCATTCTTGGAGATTCAGCTGTAGGGAAATCATCTCTTCTGCATCGCTTCACTGAAGGAACATTTGATGAATCCCGTCAGTCTCCACTAGGAATTGATTTCAAGGTGCATAACATGAACTTTGACCCTGATGTTGTGATCAAACTCCTTCTGTGGGACACTGCAGGCCAGGAAAGATTTAGCTGGCATCAGGAAGTCCTGGACTATGTGAAACCAAACCCCATGTTCTTCTTGCTTGTGGGTCATAAGTGTGACCTGGCTGTGGGACGACAGGTCCGGAAGAGTGAAGGAGAAGCGCTGGCTAAAAAACTCAACATGGTGGCTTATCTTGAGGTGTCTACAAAGGAGAACATTAACGTCAGCGAAGCGTTTGAGACCTTGACCAGAGGAATATATAACCTCTTCAAGGAAGGCAAAATACCCACCCGAGATGACTGGCAGGGGTTAACGGTTGGGGCCGCCATTAAAAAAGAGACACCTGAGAGTAAAAAGTCTGCCTGCTGCAACTGTGGATGAATTTAGTGTGTGTTTAAGGGTGTAGGCTACTCACACTAAGCACGGTTGCATTGAACCGAGCCCGAGCGCGATTGTCCCCTCTCCCCCGCTGACCTGCACTCATATAGGCCTTTTTCACAAGAATCGGAAATCACGTGACGCGGGGAAAAAGTTAGTTCCGCTATGGGTCTACGGCTATTAGATTGATATGCTCTTTTCTCAAATATCGCTTCTTACCTTTTCTGTTTTGTCTGTTTTCCAAGTTGCTGTTGTATAATCTACAAAGAAATTATTTTCTACTTGTTTGTAGCTTATATGGCCACTCAGACCGTTGCTCGAATTTACCGGCAGGTGGATTTATTTTACCAGCTGTCATACAGTATAGGCTATGCAGCTACTCATTCAGCAATTCCCCTGATCGTATCATGTACGACGAACATTACTTATATCATTTATTCA

Function

NR:

description
ras-related protein Rab-39B-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000310_01513690_01517791.mRNA True 1077 mRNA 0.44 2 1513690 1518229

Neighbor

gene id symbol gene type direction distance location
CI01000310_01508712_01511125 FAM167A coding upstream 2565 1508341 ~ 1513341 (+)
CI01000310_01414325_01452698 RUNX2, RUNX2A coding upstream 60992 1414325 ~ 1452698 (+)
CI01000310_01411744_01412226 NA coding upstream 101223 1411744 ~ 1412467 (+)
CI01000310_01394296_01394727 NA coding upstream 118782 1393089 ~ 1394908 (+)
CI01000310_01257447_01269508 NA coding upstream 243657 1257327 ~ 1270033 (+)
CI01000310_01564875_01571307 TDH coding downstream 46646 1564875 ~ 1572028 (+)
CI01000310_01588365_01597469 NA coding downstream 68263 1586492 ~ 1597486 (+)
CI01000310_01638700_01644396 FNDC4B coding downstream 120471 1638700 ~ 1644598 (+)
CI01000310_01663192_01666886 NA coding downstream 144963 1663192 ~ 1667160 (+)
CI01000310_01674884_01675180 NA coding downstream 156015 1674244 ~ 1675265 (+)
G439657 NA non-coding upstream 103085 1407707 ~ 1410605 (+)
G439628 NA non-coding upstream 146187 1357898 ~ 1367503 (+)
G439631 NA non-coding upstream 147261 1365631 ~ 1366429 (+)
G439565 NA non-coding upstream 251929 1261346 ~ 1261761 (+)
G439541 NA non-coding upstream 315620 1197604 ~ 1198070 (+)
G439679 NA non-coding downstream 4509 1522738 ~ 1523826 (+)
G439704 NA non-coding downstream 44092 1562321 ~ 1562554 (+)
G439721 NA non-coding downstream 85668 1603897 ~ 1604107 (+)
G439723 NA non-coding downstream 86622 1604851 ~ 1605069 (+)
G439741 NA non-coding downstream 132783 1651012 ~ 1651387 (+)
CI01000310_01207513_01226750 CDC5L other upstream 274285 1207057 ~ 1227194 (+)
G439115 NA other upstream 822498 651976 ~ 653356 (+)
CI01000310_00648731_00650082 NAPB other upstream 864137 648566 ~ 650159 (+)
G439845 NA other downstream 393372 1911601 ~ 1912417 (+)
G440505 NA other downstream 1581188 3099417 ~ 3136328 (+)

Expression


Co-expression Network