CI01000310_01588365_01597469


Basic Information

Item Value
gene id CI01000310_01588365_01597469
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000310
NCBI id null
chromosome length 5141163
location 1586492 ~ 1597486 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000310_01588365_01597469.mRNA
GAATAAAACAGCCGACCATCAGGGGTCAAAAAGCAGACGTCTCGTAGCTCTGCGCATCTCTGTTTATGCAATCCTGGTGTCGCTGTCATGTGTCTGACGCTCCCCTAGAGTTCAGTGAAATCTCAAGATGATTAGAGAAGCTTTTCGTTCTATCCTTAGCTGCCAAAGTGCCCTGATTAGTGGCCAGACCGTTTGTGGGAGGGCTTGTAAACTTGTGTCCCTGTAGCAGTCGTGTGCTTGGATGCTACCTGGAACGTTACTCTGTATAGTCAGATTCTATTTTTATTTTTCATTTTTTTATACAGTTTTTTAGCATCAGATATAATAATGTATTCTGAAAATGTAAGTATATTGTTCACATTATATATATTTTATATTATAGTTTTTTATATTGAGCTGCCTGGCTACACAACTAACGATCAATTGTCTACATTTTATAATTAGAACATAGAGTGTCATTTTATTCAATCTGGGCTGTCATGAAATAATTTTTTTATTAACTACCTCCAGGTACACTTTTATTTAAAAAAAAAAAAATTGTTATAAGAAATCTGGTTAAACTGTCTTTGCTCTCAGTTTGATGCACATGAAATGATTTTGTGCACAAATTTTGCTCAGAGATGATGCTCTTGAACTTCTTCTCAAATGTTGGATTAAAGTACCTATTAAGGACTAAGAGCTAAATGCAATTTAAGCTATAGTCTGTAACTGTTTCCCAAAGTGCATGAGATTAACTTCTGGACTGGGGCATAATTTTACTGTTGCTTATACTACACAACATGTCATTTAAAAGTGTAATACAAGTTTGACTGAAAAGTTGAAAAGTCCTCATGGCATGACTAGATTGCAATTAAGTTTAAGGTGGTTCTTTGCCTCCACATCATGCTGTAAAGTTGATTATAAAACTGTTAGTTCCAGTCCTTGACTCTGATTGGTCAATAGCTGTGTTTTATTCACTATAAAACATGGCTATGACCTCTTCACCCAATGGTTCTGTGTATCACTACACAACACCCTTAGCAGCCACTCTTAGCAACGCAAACATATATTGGTTCTTAATTTATATTGTTCATTTAAAGGCTCACTGAAGTGCCTTGGAACACGCAGCATTATTCAATGTGTTGACATAATTTCAACTGAAACAGGAAGACAGGGCGGGACATATCGAACAGCTCCGCCCCTTTTTAAAAATAGCCAATAGCATTTTGTTTATATCACAGCTTGGCCAGAGCCGTTGAGCTAAAGCTTTAGTTTTCTTCTAATCTCTAACTGTTTCTTCTCCTAATCTCCTCTATATCGATTTAAAATGCATTCTGTGCAGAATTCAAATGGGTCCGCCTGCTTTCAAACACTCCCGTCTGTACTGTTTCTGTGTAAGTGCTCTGTAAAGACTCTCAAAGATATCTATTTACAACATGTTTTTGAAGTGGTGATCATTGTAGCTAATCACAGACATATCTTTTGAGCATGTGAACACAGTGGCCAATCAGAGATGTTTAGGAATCCCCTCAACAGCACTCAAAATGCTAGGGGGAAATAGTGCTATCATCACATTTTTAAAATTTCAGTATCATCTTGGTACTGAAGTCGGTACTTTTGACAAGCCTAGTTTAGACTAAATATTCTGATTACAGACTGTGGTTTCTTGGCAAAACTGAGCACAGTTTGAGACATTGTTGAAACCTGTTCTCAAACCCTACAACAGAGACATTACTAGGGTCTCCATTTAATCAGTTTCTCTCTAAATGTATGTTTTATAAAGATTTTTCTCTTTATGGGTTTGAATTTGTAATTTGTGTTGATTGCGAGTTTCCGATAATGTCATTCACATTTCCATACTCTTCCCCACAGTTTGAATTGACGTGGAGGAGAGATGCCGAGGGCAGCCCCAGGCTCCTTTGACGCCGATACCCATTTTCAAAATGAACAGTTTCCTCATCCTCCAACATCGTCTTTTGGCTCCAGCGTGAAAGCGGCCAGCTCAGCCAAAAGAATTACCTTCTACAAGAGTGGCGACGCTCAGTTCAAAGGGGTCAAGATGGCCATCCATAAACGCAGCTTCAAATGCTTTGATGCCTTATTGGATGACCTTTCCCAAAAGGTTCCTCTACCTTTTGGTGTGCGTACTATCACGACCCCCAGGGGCACCCACAGCATTAAACATTTAGAGCAGTTAGAGGACGGAGGCTGTTACTTGTGCTCTGATCGCCGCTACGTCAAGCCAATCAACATAGAAGCTGCAGGGAAGAGGCTGGCAGTCTGGCACCACCACAACCACCCACATAATCCTCGCCGGAAGCCCTCCCGACCTGAGGAATCCCCCTCGGGACATCAGCACCACTATCGGCACCCCAAAAGAATTGTTCTAGTGAAAAACAATGACCCTGCTGTTAGGCGATCCATCATTCTGAGCAGACGAACTGCTCGAAGTCTTCGCGTCTTCATGGACGAGATTTCAGAACTCATGCAGTGTCATGTCAAGAAACTCTACACTCTGGAGGGACGCAAGATTGACAACATTCAGAGTCTGATGCAGTGTCCTAGTGTGCTGGTCTGTGTGGGTCGAGAACCCTTCAGACCGCTGCTCATGGAAAGCTTAAAGAAGCTCTCAGATGAAAAGCTTCCAGGAATGGGCACAAGGTCTCACTCTAGTATCTGCAGTGAAAGTCATGAAAGCAAAAAGAATGTTAACTTTGGCCTGGAGACAAAGAAAAGCATTATCCATCCAAGATCTGACTCCAGTAATAGATCTACAAGATTCTCTCTTTCTTCAGAAAAGTCCTATCAGAATGGATTATGCATGACACCAGGACAGTCCGGTTGCGTCAGCTCCTGTCCTTACATTAAAGAAGTTGTAGTGAATGATGACATTGAGAAGAGAGTGCTTGTTAACAAAGACGGCAGCCTTTCTGTGGAGATGAAGGTTCGCTTTCGGCTCTTCAACGATGAGACTCTCCAGTGGTCCACCGAGATCAAAAAGTCAGCCACAAAAGTGAATGACTCTGGCTCCATAAAAGACAGTGATTATCTTCAAGCTAAAGCTGAGTATTCAGACCCAGACTCCATCTCTGCATCTGAAGAGACTGATGAAGCCTTTGCATCAAAGTTGCATCAGAAGCATCTTGAGGAGACACTTTGTCAGAACTGTTGCAACCACTGCCAAGAGTATGACATCTGGAAAAACCCCATGCACAAAGACCCGGGGGCCTGCAAATCACCCAGTTCCAGTGGATCATCTCACAGAGTTGTACGCAAAAAGTCATCAGTGGATAGTACACACACAATTTCTCGCTCCAGTGGGGAGTACACTGAGCATGTGGTGGAAAAGGCCTCATGCTTTCAGCAGACAATGGAGGAAGCGGACACCAGAGTAGAATACTGTGCAGTAAGTCGTTGCTGCAATCGAAGTGAAGTATCATCTGCTGGAATCATGTCAAAAAGCAAGAGATCTTGTGAAGACGGCTGTGAGAGTCACATTAAAAGTAGATGTTCTCATACGGAACCTGAAATCTCTCCTATGCCACATTGTGAGGTCTTTAATGTCATGGAAGAGCGTCCGATTTCTGCAGTCAGCAACTCATCCAATGTGCTTGAGTCTTTGAAGGAAGATCAGGATGATGATTATGATGACCTGCCTCCAAGCATCTCAAGAGCAACAGACTGGTCTCAAAGTGAGAGCGATGATCAACCCAAATGTGCTCATTGTTGTGGCCACCAGACTTCACCAAGATCTTATTTGTCCCCTAGACCTCCAAGTAAAGAATCAAGCAGTGTTGTTCACTCACTGAAGCTGAAAAAGTATAAAACCACTTTTGCAGCACCAGTAGAGCCAGACGGGATGAGTACAACATCTCCAGTTTCAAAAGTGTCCTCCAGGTCCCATCCATGTCACTGTGGAGCCATAACCCCAAGTTCAGCTGCATCTTGTCAGCAGCACAGGCCTGAGGGGAGGGCTTGTAGTACAATTTCTAGACATAGCCAAGCATCTTGTAAATCTAGAGGCCAAGCAAGCAACCATGGAATCAGTGCATCAAATGCTCTGGACATATGTGACGGTAATGCTGAAAACAGATCTTTAAGTCCCACGTCAGGTGTGTCGAGAAGATCTGGCAAGTCTTCTGTATGTTCATGCAATCCAGAGGGCAATGATCCAGTGAAAGATGATTCCACATTGTTGAAGTCAAACAAATCTGCTGCATCCACTTCAAATGCTCATGAAAACTGTGAAGCTGTTAATAATACATTGGAAGTGGAAGCTACACGGGAACACTCTGAGTCTGCACAGTCTAAAAATTCAAATGCCTCTTCTACTTCAAAAATCTCCAAAAGGTCCAACTGCTCTGCTCATGAAATGTGTTCTATTGGGAAATCATTGAAATATGAACATAATGAAGCAGAAAGAGCTGAAGAAAGAACCAAAAGTGCCACATCAGCAATGTCAGCTGTGTCAGACTTTATTATTTCAGAGAGAGAGCCCACACCAGCCTTGGTCCTGACAGAAACAGATGAAGCTGAAGAAAAAAGCCAAGAAAGAGCTGTCAGCCCAATGTCTACGCATTCAAATTTATCAGCTGTATCGAGGACATCCTACAAATCAAAATCTGCACATTCAGAGAAAGCTAAAATGCCTAGATCTTGTAGTCCAAATGATTTCAAAGAGGTGCCATCAAAGTTACTTAATCCTCAGGGTGATAAATCAGCAAGTGCTGCTGCTCAAAATCATACCACGTCAGATAATCATTGTGGACAAGACACAGAGTTTCTTCAAGAAGTGAGATCAACTAGTGCCATGTCTAATAAATCAAACCAATCTTCTGAACATCCATCACATGCATCAGAGCAAACAACTAGGTCTGTCAAATCTTGTTGCGACTTACAAGACAAAGCCACTCCAAAGTCCAGCCTTTTTGATATTCAGTGTGAGCTGGAAACTGAAGTAACCACAGGGGAAAGACTATGCAGTTCACTGTCCAACTGCTCAAAAACTTCTGTAAAGTCAAATGTATCCTCAAAGCATTCACTCACAGAGTCTAAATCTACGGAAAGAGTTCACAGTGCAATGTCTGTTAAAACAAATGCATCTAAACGGTCTTGTAAGTCCTGCAAATCAAACCACAACTTTTCAGAAAACACAGTTACCTCAGTACCAAATGATGTAACACCTGAAGAATGTGCAAGTCCAAAAATCGAGTCAAAGAGAGCTACCAGCACAATGTCTCAGACCTCAGAAAAGTCTAATGCCTGCTCTGAAAGATCTGTTAAATCCAGTGCAAACAGCCCTGCATTCCAGGAAATGGACAATGGCAAAGACATGACACAGAATGCCTTAACTGTGACCTCTCTATTGTCTAGGACAAAGAGGTCTCCATCTCCTAGATCAAACGATGACACTAAAATTAAGAAGACTAATAGCAGAGCAACAAGTGGGATGTCAGTAAGTTCTAATGTATCATTGCAATCCCAAAGATCCAGTAAATGTAATTGTCACAGCTCCTCAAGTTGTAATTTGAGAGAGACGAATCCTGAGAAGCTAAAAGAGGATGCCAAAGATGAATCTGAGGAGAGCTTGTCAGGAAAATCAAAACTGTCAGATAAATCTCTTATCAATAACATTAAGTCTTCAGGCAACCAGTTTGATGAGCCTCTAAGCCCAACATCAACAGCATCTGTTTCTCTTGGACTAGGAGAAGAGCACAAGGGTGAAGACTTTGATGAACGATCAATCAGTGGCATGTCTGCCACCACAGAGGATGGTGGACATAAGATAGAGAATGTAAATGGAGTGGATGCTGAAAGGCCAATGACAGAAATGTCTGTGAACTCTGCAACTTCAGACAGACCCAAAAAGTCTCATCACAAGAACTGCAAGACTCCTGTTCAAGCCCTCTCGCCTGTCTCAGCTGAAAGCATCATGTCAGCAGAACCGAAGAACAGAAAGTCAGGAAGCCAGTTAAATGAAAACAACATCAGAGTGCCCTCCACTCTGTCACTGTCATCTTCACGAAGTAAGTCACCCTCCAGAGTTTCACAGAGAAGTGCTAAAAATACAGTTATGAAAGAGAGAGATTGTGAAGCTGTCAACAACACCAACCATGCAGAAATGACTGAAACATCCTCAAAACATGACCAAAGAGAAACAGCTTCTGGAAAAGCTACACCAGCAAGTGACTGTTTACACTCTTCAAGAGCTCTTCAAATGTCTAAAAATAGCCAAACTACTAGAGAGAGTGATAAAATATCTAAATGTTCTTCCCAATGTTTGGAAATGAATGGACTGAATATAAAATATAACAGAGACAATGCTGGGGGGATGGTTAAGTCTCTTAAAACATCCACATCAGACAGAACATCTGTGAAAAATTATGCATCCAGGCCAAATTCAGCGGTAATGTCTGATATTTCCCAAAAATGTAGAAGTCTACCACAACAGATGCCAAACAAGAAAAAAGCATCAGACAATCATCCTGATTCTTCAAGTGACAGTGTTTTATCTCAGGCACTTTCAGCAGCAGATTTGTTGAGAGATATTATTGATAATGCTAGACCAGTGAGTAGAGGATCAAAGTCAGTTACCTCCAGCAAAAATGTTGACAAGGTAGAAAATAAAAGCCAAAAAAGCAGCAGGAGCAAACATGAGGAAGTCAACAACTCATCAGATTGCAACAAAAAGGAACTGGTGCCGTCATGCTTACCGAACACTTCCCCTATAGAAGTTGTGAATGACTGGCTTAGGAACATTCCCATTGAAGGCCATGTTTATGAAATGGATGTGGAACTCACTGAATATATGACCCTGGCTCAAGGTGTTGAGGAAACTTCTGAAAGGGACAAAGGTGAGGCACCAGAAAGTATAATTGAGGTAGAGGAACCTTGTGAGGATCAAGCAGGTGAGAATCATATTCAGCAGGAGACCAATGACAGTTGCGGTGAAAAAGCACAATTGGAAACTCAAGAAATAGATCCCAACCCTGAAGCATTAACCAAACAAGACAGTTTACAAAAGCAGTGCCATTCTTCGGTTCAGGTCATGAAGGTTTTACTGGGTCCAAAACTAGACAGATCCACTAGTTTACCTGAAGTCTCCCCTGTTTATGGCAGAAAATTAAGTCAGTCTGCTCAAGGGCTGTTGGACTGCCTTGCAAATTTACGATTGATTGACTCAGACTCTAAAAATGAAAAACATCGTAAATATAATGAAATCATGATGATTCTACAGTCCCTCTGGCTCCAAAAGCCCTCTGAGGATGAACATAAGAAGCAGAACACAAAGGAACATCAGTCCGAGGATGAATTTAACCCACGGTCTTCATCTGGGGTTGATGTAAGCGGCGGCTCCACTGGCTCTGTTAAAGGTAGCGTGAATGGCATAGTAGAAAAAATAGAGACAGCTCAAAGCACAATACCACCAATTGCCAAACGAGAAGCCTCAGTCCAAGATAAACATGAAGAAGAAAATGAGGAAAAATCTACAGCTCCTGCATGTGAATGTTTAGATCCATCCAAAGTTCTCTCAGATCCAGTTACTCCAGACATTGCAGAGCAAGTACTGGGGAGTCCAGTAAATACACAACTGGATGAAGACCAAGAAAATGGCATATTACACAAAGAAGATGTTGAAAGTAGTGAGAATAAGAATGATTCAGATCAAACACCACAAACAACCTCTTATAAGAGCTCTGGGAATGAGAGTTATACAATGAAATCTCAAGAAAATACAAGCTCAGGATCTCCACCGTCTGTTCAGAGAGCTCCGCTTACTAAAAGAGTTTCACAAGACCCAGATCCCATTTGGGTACTGAGCTTATTAAAAAAGTTAGAAAAGCAGTTCATGTTGCATTATGCAGATGCCATGGCAGAATTCAAAGTGAGGTGGGATTTGGATGACAACGAGATGCTCGATACAATGATCAGCGAACTGAAAGAGGAAGTACACAAACGGATTCAGTTAAGTATTAATCGAGAACTGCAAAAAATCCAAAGTCGGGCTGGTAGGGGTCCAAGACCTCCGGGAAATACTCTATCCAGAGAGTCTACGGCCCAGACTGAGCAGCGACGCAAACGTCTTCGGGTCATGCGCAATAAGTCCATCTCCATGTCAAGGAGTGATGAAAATTACACTGCGTCAGGTACGGAAAACAGTGATCAACGCAGTGATGATGAATACTGCCCATGCGATGCATGCATGAAAAAGAAAATGGCGTCCAGAGCAGTCCAGCAAGCTCAGGCTTTGAGTTTGGCTCCAGTTATGATGGAATTTGATCTGCGGAAAATTTTACAAATGAAAAAGGATCCAGCCAAACCTCTAGAATCAAAGCCAGAAGAACAACGTACAACCAACTTGACTTGTGGAGTTGATAAAGAAGAAAAAAACTTAGAAGTAGTTCATGAAGAGGTAGAAGATACGAATAATGGTACTAGAGGCCATAATGTTGGGACGGCAAATCAAGAAGAGCCAGATGGTGCTCTCAATGCAGTAGACCAAGGCAAAAATGCAAACAACATCAAAGATGTATCTTTAGACTCTGAGAAAAGAGATCCAAATGAAGAGGAAACAAATGACAAAAGAGAGTCTGGTGATGTGGAAGGTGGTGAAGATGAGGAGAAAGAAGGTGAGCATGTGAAAGAAGTTGTAAATGGTAAGACAGACACTGGGGGGAAAGAGGAAGTAGAGTTTGTTGAGGAAGAAACTGAAAAAGGAGATACAGAAGAGGATGGTGAGGAGAAAGTCAGTCTTAAGGGAGATGCAGCAAACGCAGAAAACAGTGATATGGCTGCAAAGGCAGAAAAAGAGAATGAGATGACAGAAACTGGTGACGAAACCGAATCAGGTGACAACGGAGCAGAAACTGAGACTGGGGAAGAGAGTACACAAGACAAGTCTGCAGAAGATGGTAGTGAATCTAAATCAAATAAAGACTATACACCTGAAACTACTGAAGGTGAAAAGTCAGATGAGACACCAAATGAAGAGTCTGCCAGTGACAAGAATGCTGATGGAAACCAAGATGTATCTGCAGAGGACGATGGGACATCAGACACAGGACATAACGAGGACCGGCCTGAGGGAAAAGCCAATGTGCCAAAGGTAAAGATCGAGGTTGAGGTCAGAGGAGACACAGAAAATGAAACGGACAAATGTAGCTCTGTTGAGGAAGATTTCGAGAATGATAAATCTGATGAAACCGTTGATGATGGCTGTGAGAGCACACTACCAAAGCAGGTAACAAGAACATCAATGGAATCTCAACCAGGATCTGTGGAGAACTGCACAAATCAGACAGCGCAAGCTAAACTGAAAGATCTTCAGAGTTTCATGGAGAGTGTTGAAAGTCAAGGAGACAACATGGTTGTGATTACTAAACAACCACCATACAAAGAGCCACATGGACCAAGAAACCAAAAGGACATGTGCAATGGCTTGACTGAATGGCAAGTGTCTCCTAAAATAAGCAACAGGGCCAGTAAACAAAAGAATACAAAGGATGGACAATAATGTTGTCCAATGAACAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000310_01588365_01597469.mRNA True 9510 mRNA 0.42 3 1586492 1597486

Neighbor

gene id symbol gene type direction distance location
CI01000310_01564875_01571307 TDH coding upstream 14464 1564875 ~ 1572028 (+)
CI01000310_01513690_01517791 NA coding upstream 68263 1513690 ~ 1518229 (+)
CI01000310_01508712_01511125 FAM167A coding upstream 75367 1508341 ~ 1513341 (+)
CI01000310_01414325_01452698 RUNX2, RUNX2A coding upstream 133794 1414325 ~ 1452698 (+)
CI01000310_01411744_01412226 NA coding upstream 174025 1411744 ~ 1412467 (+)
CI01000310_01638700_01644396 FNDC4B coding downstream 41214 1638700 ~ 1644598 (+)
CI01000310_01663192_01666886 NA coding downstream 65706 1663192 ~ 1667160 (+)
CI01000310_01674884_01675180 NA coding downstream 76758 1674244 ~ 1675265 (+)
CI01000310_01693209_01696414 NA coding downstream 95243 1692729 ~ 1696871 (+)
CI01000310_01723036_01723254 NA coding downstream 125550 1723036 ~ 1723550 (+)
G439704 NA non-coding upstream 23938 1562321 ~ 1562554 (+)
G439679 NA non-coding upstream 62666 1522738 ~ 1523826 (+)
G439657 NA non-coding upstream 175887 1407707 ~ 1410605 (+)
G439628 NA non-coding upstream 218989 1357898 ~ 1367503 (+)
G439721 NA non-coding downstream 6411 1603897 ~ 1604107 (+)
G439723 NA non-coding downstream 7365 1604851 ~ 1605069 (+)
G439741 NA non-coding downstream 53526 1651012 ~ 1651387 (+)
G439697 NA non-coding downstream 73396 1670882 ~ 1673466 (+)
G439759 NA non-coding downstream 163906 1761392 ~ 1770560 (+)
CI01000310_01207513_01226750 CDC5L other upstream 347087 1207057 ~ 1227194 (+)
G439115 NA other upstream 895300 651976 ~ 653356 (+)
CI01000310_00648731_00650082 NAPB other upstream 936939 648566 ~ 650159 (+)
G439845 NA other downstream 314115 1911601 ~ 1912417 (+)
G440505 NA other downstream 1501931 3099417 ~ 3136328 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location