CI01000310_02789811_02790561 (MYCT1B, MYCT1)


Basic Information

Item Value
gene id CI01000310_02789811_02790561
gene name MYCT1B, MYCT1
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000310
NCBI id null
chromosome length 5141163
location 2789530 ~ 2791080 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000310_02789811_02790561.mRNA
TAATATAATGGGGTGAAGAGGCCATTGTATTGTATCCACTGAAACAAAGGAAATGATGCAAGAGGAAACAGCTCTGTTCCCCTGGATTTCTGTCCAGAACAGATAAGCCAAGCACTTGCTAATTTTACAAGTAAAAAGGCAGGAAGAATGACGACAATGTTTCCCTTTATGCAAACAAAAAAAATAGAAAAGTGCCAGATTCCCTGAGAAATACAGTGAACAGTCCTTGTGGGCTTGGATTGAGAGTTTGGCTGCATGGTGACATGCTTCTGCTAACTATTATGGCTTCAAATGAAACAAATGCGATTTGGGAAATACTTAAACCTATTGATTTTGAGGAGCTCATCCTGGCGTTCTGCTTGTCGATTTTGATGGGTCTGCTAATCGGGATCTTGATTTTCCTCCTCCTTACGTGGATGTCAAGACGGAGAGCTTCGGTCAGGATCACCAGACGTCAAAACCAGTCGTCAGAATCTAAAGGATCACGTAATCAACACTGCCACCTCAGACACTACAAGAGTCACGGTTTTGACAAGAACACTGAATTTGTGGGAAGAACGGCTTTAAACCTCCACAGACAGACTTCTGTAGACCCCAATGAGCTGCTGGGCAGAAGCCCCAGCTTTCAGAACTCCACTTTTCGGCCACCACAAAAAAAGACTAACAAGACTAGTGAAACAGAAGATGATAACCAAGCTGCATTAATTCCTAACATCACAGATCCGTTTAGTACGGAACCAGCAGAGTCTTTCTGGTTGGGGAAGGGCAGTCTAAGAGGATTTCTACCCAGACAGACTCCACCACCTGCATATGACAGTGTCATTCACGTCTTTCAAGAGACCTGCACCTGACTGCACTGTGACAAGAGACTTCAGGATTGTACATAAATTTAACTAATTTAAAGCCTTGCTCTGATTTGAGAAGGGATCTGATTTATACTACTGACACTCATTTGACTCATTATCTTCTTGCAAACTGTGCAAACAAGAAAAAATGTAGGGCGGGACTTGATTTTGTCCATGGGTAATTGATTGGATGATTGTGGTTTGCTATTGCTGTGATCTCATGTGAGTGACAGGTTGTCCCACCCTCAAGCCAGTTAACACGTCATCAGTGAAGAGATGTCGCTGTGGGAAGGGAAGTTATTTTGATTAAAGTTTATGAGGGAACATGCATTTAAAAATAATGATGTGCCCTGGTAAATCATGTATAATAAAATAATGCAATTTTCCATAAAAAATCAAAAACTGTCCATTTTTGATATTATGGTGACTTTAATGTTGGTATGATAAAGTAACCTTACTGTAAAGTGTAACTCTTGCATGCAGTAGTGTAAAATGTTGAATTGAATTATTTTTAGGTTATGGCCA

Function

symbol description
myct1b Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in nucleoplasm. Orthologous to human MYCT1 (MYC target 1).
myct1 Predicted to act upstream of or within hematopoietic stem cell homeostasis. Located in nucleoplasm.

NR:

description
unnamed protein product

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000310_02789811_02790561.mRNA True 1370 mRNA 0.41 2 2789530 2791080

Neighbor

gene id symbol gene type direction distance location
CI01000310_02658724_02665972 CCDC170 coding upstream 123351 2658724 ~ 2666179 (+)
CI01000310_02639022_02649415 NA coding upstream 139864 2639022 ~ 2649666 (+)
CI01000310_02572928_02575251 FBXO30A, FBXO30 coding upstream 214174 2572928 ~ 2575356 (+)
CI01000310_02562834_02569144 NA coding upstream 220273 2562389 ~ 2569257 (+)
CI01000310_02549824_02559417 SHPRH coding upstream 230039 2549824 ~ 2559491 (+)
CI01000310_02793777_02805490 TULP4 coding downstream 2697 2793777 ~ 2807092 (+)
CI01000310_02810800_02814032 SLC18B1 coding downstream 19229 2810309 ~ 2814084 (+)
CI01000310_02823791_02825399 NA coding downstream 31557 2822637 ~ 2825761 (+)
CI01000310_02861303_02864477 NA coding downstream 69495 2860575 ~ 2865057 (+)
CI01000310_02876181_02939106 CDC42BPA coding downstream 85101 2876181 ~ 2939106 (+)
G440427 NA non-coding upstream 113031 2675300 ~ 2676499 (+)
G440423 NA non-coding upstream 131692 2657601 ~ 2657838 (+)
G440401 NA non-coding upstream 136136 2652439 ~ 2653394 (+)
G440420 NA non-coding upstream 154069 2635200 ~ 2635461 (+)
G440419 NA non-coding upstream 156331 2632896 ~ 2633199 (+)
G440472 NA non-coding downstream 35669 2826749 ~ 2827136 (+)
G440477 NA non-coding downstream 54843 2845923 ~ 2847548 (+)
G440483 NA non-coding downstream 63916 2854996 ~ 2855588 (+)
G440623 NA non-coding downstream 258430 3049510 ~ 3049788 (+)
G440533 NA non-coding downstream 304911 3095991 ~ 3098488 (+)
G439845 NA other upstream 877113 1911601 ~ 1912417 (+)
CI01000310_01508712_01511125 FAM167A other upstream 1276189 1508341 ~ 1513341 (+)
CI01000310_01207513_01226750 CDC5L other upstream 1550125 1207057 ~ 1227194 (+)
G439115 NA other upstream 2098338 651976 ~ 653356 (+)
CI01000310_00648731_00650082 NAPB other upstream 2139977 648566 ~ 650159 (+)
G440505 NA other downstream 308337 3099417 ~ 3136328 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_011243 myct1b coding NC_007128.7 CM002901.2 8175998 ~ 8179152 (+)