CI01000310_02823791_02825399


Basic Information

Item Value
gene id CI01000310_02823791_02825399
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000310
NCBI id null
chromosome length 5141163
location 2822637 ~ 2825761 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000310_02823791_02825399.mRNA
ACATAAAAGCCACGACCTATTTTGGTTTTCATTAAACCGATAAAAATGGAATATTGCTGTATTGACAGTTTTGACAGACACATTGTTTTAATGTGGTATTTGTAGTTAAAACACAGTAACACAACACTTACCATGCTTTTACCAAAGTTACTGTAGTTTTAATGTGGTATTTGTAGTTAATGCACAGTAACACAACACTTACCATGCTTTTACCAAAGTTACTGTAGTTTTAATGTGGTATTTGTAGTTAAAACACAGTGACACAACACTTTTACCACAGTTACTGTAGTTTTAATGTGGTATTTGTAGTTAAAACACAGTAACACAACACTTACCATGGTTTTACCACAGTTTCTGTAGTTTTATTGTGATATTTGTAGTTAAAACACAGTAACCACAACTCTTGCCATGCCTTAAATACCTTTTTGTATTGTAATTCAATATTTTTTTTCTGTCCTGCAGTTACTTCAGATGCGTACTCCTCCATCTCCATCTAACAGCTCTTTTAAGAAGCCATCTCTCGCAAAAGCACACTTACTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAATTCAAATTCAAATGAGCTTAATTGGCATGACTTGTACAGTATTGCCAAAGCAGTGGCCATTATATGAGCAATGAACAAAATAATGATTATAGAATACATAAAAAATAAGAATAAATAAATACATGAATAATTTTTTATACACAAGAAATAACAATACAATTATTAAGACAAAATTAAAAAAAAACAAAAAACTGTACATGCATTCAGACAGGTTAAGAATATTCTCTCTCTCTCACTCTCTCAGCTTTTCCTTGCCTATTTTTCTGACCTGTAATCCGTAATTAATTTACACATATTTTTGCTCTCTTTCTTTCTTCTTCATCATGGCATATTTTTAAAACTCAGAATTAAATTTTGACCATTTCTGTCAGAAAGCTGCTTGTAATAATAGGGAACTTGAACTCAAATCTCCCAGTGCTGATCTTGAAGAAGCTGCCAGGGAGGCTGAACAAGTCCTTCAAAGGTTCAACCCTTCACAGGTATTGAACACAGTCATTTTATGTGGTAGTAACTACTTTCCTTATTCCTTTATTTTTAACACACTGTCTCATCTTGTATATATTTCTTTTTGTTTCAGCTGAAAATGAGGACCAAAGGAAGGGCTGTCAAAGTCTTGTTGAACCTGTCTTGTTTGTGGAGAGGGATGAATTTGGCCATCTTGTTCGTTTACGGAGAAGACAAAAAGCTGCGAAGGCAAACATTTCCAATGCACTGCAGCCTGAAACCATCAGTTATCTGCTGTGACTGCATTCCCAAACAACTCTACTGTGACAACTCAGATGTTATGGCCCAGAAAAGTAAACCTCACAACTGTGAGAACCGAGAGATAACCAATGGGGATCACACATGGCCCATCCACACTGATGCAGTGCTGAAGAAGGCTCATCAGTCTTTTCTTCCTCAGACAGATGAGGAGGTTCAGTGCAGACGTTATCACAGAACCCTCATCAGCAGACTGCGAGACAAGTTCTTTCCACAAGCAATCAGACTGTACCAGTAACACCACACACAGCACACCCCACCACCTCATATGCACTGCACTCTATCAGTTACACTGACTGGACTCTGACTCACCCTGACATTCTGTTTGCACTAATTCATACTGTACTGCACTGCAAAGGTATATGTATAATGTGATTATGTTGTTTATTATTGTTTTCATTCTGTACTCTGTGTATAGTATAATATTGTACCATATATTGTTCTCTACCTGTATTGAGTCCCTTATGTATAATGTTTATATTGTTAATACTTTATATTTGTTGTATATATATTCTATACTTGTCATCCATACTGTCATGCTGCAGAGTTTGCACTAAAGTATTTCATCACCTGTACACTTGTGTTCATGGTATTGTGACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000310_02823791_02825399.mRNA True 1933 mRNA 0.36 4 2822637 2825761

Neighbor

gene id symbol gene type direction distance location
CI01000310_02810800_02814032 SLC18B1 coding upstream 8553 2810309 ~ 2814084 (+)
CI01000310_02793777_02805490 TULP4 coding upstream 15545 2793777 ~ 2807092 (+)
CI01000310_02789811_02790561 MYCT1B, MYCT1 coding upstream 31557 2789530 ~ 2791080 (+)
CI01000310_02658724_02665972 CCDC170 coding upstream 156458 2658724 ~ 2666179 (+)
CI01000310_02639022_02649415 NA coding upstream 172971 2639022 ~ 2649666 (+)
CI01000310_02861303_02864477 NA coding downstream 34814 2860575 ~ 2865057 (+)
CI01000310_02876181_02939106 CDC42BPA coding downstream 50420 2876181 ~ 2939106 (+)
CI01000310_03054431_03066827 EDRF1 coding downstream 228670 3054431 ~ 3067384 (+)
CI01000310_03069663_03095555 TONSL coding downstream 243774 3069535 ~ 3095888 (+)
CI01000310_03165171_03170431 PSMC1B, PSMC1, PSMC1A, PSMC1.L coding downstream 339176 3164937 ~ 3170431 (+)
G440427 NA non-coding upstream 146138 2675300 ~ 2676499 (+)
G440423 NA non-coding upstream 164799 2657601 ~ 2657838 (+)
G440401 NA non-coding upstream 169243 2652439 ~ 2653394 (+)
G440420 NA non-coding upstream 187176 2635200 ~ 2635461 (+)
G440419 NA non-coding upstream 189438 2632896 ~ 2633199 (+)
G440472 NA non-coding downstream 988 2826749 ~ 2827136 (+)
G440477 NA non-coding downstream 20162 2845923 ~ 2847548 (+)
G440483 NA non-coding downstream 29235 2854996 ~ 2855588 (+)
G440623 NA non-coding downstream 223749 3049510 ~ 3049788 (+)
G440533 NA non-coding downstream 270230 3095991 ~ 3098488 (+)
G439845 NA other upstream 910220 1911601 ~ 1912417 (+)
CI01000310_01508712_01511125 FAM167A other upstream 1309296 1508341 ~ 1513341 (+)
CI01000310_01207513_01226750 CDC5L other upstream 1583232 1207057 ~ 1227194 (+)
G439115 NA other upstream 2131445 651976 ~ 653356 (+)
CI01000310_00648731_00650082 NAPB other upstream 2173084 648566 ~ 650159 (+)
G440505 NA other downstream 273656 3099417 ~ 3136328 (+)

Expression


Co-expression Network