CI01000310_03453336_03456200


Basic Information

Item Value
gene id CI01000310_03453336_03456200
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000310
NCBI id null
chromosome length 5141163
location 3452711 ~ 3457834 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000310_03453336_03456200.mRNA
AAAGCTGATTTGCCAAACCTCTGTCTCATTCTGGCCCCACTTCGCCTGTTTACATAGTGATTTACTGACTGAGATTGACAGATAATTACATCACCCCAAACAGTCACGAGAACGCAAAAGCAAAAGCAAACAGCCAGTGCATGAAAAATAATATTTTGACATAGCTGACTGCATTCAACATCTCATATACATCAATTCATGCTGTCAGGGTGGGGATAATTTACTTTTTCTACTCTACGGCAGAAATTGCACCAACAATATTTTGCATATTCTTAAAGCTTTGCCAGTGTATTACTTTTTACTGTTTGGTAAAAGAATGTCAACGCAGTTTCTCGCAGTTTTGCACCCACAGAGACTTTTGAGAGGAATACAGTATTTGCTTGGAGAAAAAAACCCCTGAATGATACTAATAAAAACCTAAAATAATATATTCCAAATGCTATATTAACTCACTAATCATAATCTCAAGAAATCAACACTAATGTTTACTGTAACATCAGAATAGACTGCAACTTTATATTACAACAGTACATTTCAACAGCCAACAAACACACAAAAAACACAAATTTCTAGTCAAAGCAGAGAATGTGAAAATTATACATAATCTTGGAACTTAAAGTCAGCGTAAATTGGAAATTCACCCTATTTATTTTGCAAATGCATGTTATTGGTCTTGTTGTGAATGATTCATATACCGTACGCCTGTTTAATCTTTGTAATTTTTTTACCCCTAATTTTTAAATCACAATATCAAAACTTCATCTTCCGATAAAATGGCGTATTCTGGACTTCTCCAATCATTTCGCACGTATAAACTCCTCTCCTTTTTTTACAATCAACCTCAAGCTCACATTCAGATCTGCCTTCATCAGTCAACAAACGATAGATTGAACCATTTCCCTGCCCTACATTTTTTTCTTTTCGGAAATCCGTTTCACTCAGCTGTACATAACAATATGGAAAAAAAAATTATGTGACCGTGGACCACAAAACCAGTCATAAGGGTAAATTTTTTGAAATTGAGGTTTATACAACATCTGAAAGCTTAATAAATAAGCTTTCCATTGATGTATGGTTTTGTTAGGATATGACAATAGTTGGCCGAGATACAACTATTTGAAAATCTGGAATCTGAGGGTGCAAAAAAAAAAATCAGTATTGAATAAATCACCTTTAAAGTTGGTCAAATTAAGAACTTGGCAATGCATGTCCACTCACAAAAGTAAATTTTTGATATATTTATGGTAGGACTTCTATCTGTCTTTTGTTTGCGTCAAATGAAATGCGTCATCCACTCTATGCATCCACTGTTTCCTAGTATATGTCATATGCTAATCTAATAACAGCTCTAGAACTGCTGTTTGCTCTTTCATGCACGGTAAAGAGAGCGCAACAGTTTGACGACAGGCAGAAAATAGAGACCCTCCACCTCAGGCCGCAGTCGATGTGTTTGTGTATTTGCGTGTGTCTGTGCGCTCGCTGGCTTTAATAAACATCGCCGGCGTGGATGTTTCTAAGTCGGGGCTCTTTGGCATGGCCTGTAATAGCAGTGGAGCGGCGGCTCTCACTCTCGCGGCTTGAGAGGCCATTACCCGAGCCAGCGTGCTTTTCCAAGCAGTACGCCACTAGCAGCCATGTTTATTCATGACACAAGCAGCGAGACCTGCAAGGTGACTACCTGTCAGGAGCTGCCAGCTTCACACAGCTCTCTCACCCTGATTTCATCTGATAGATGGGAGGAACTGGCTGCCGAGCGAGTGAGGGTAAGTATCCGTGCAGCAGCGGGACTTACTTTATCTCACAAAACAACAGGCAAACCAGACAAACAGAGTGTTCCTCCAGCTGTTGAAGCTGTTGTTTCAGCATGGCAACACAATGCAATTCGCCTAAACTGCAGCACAGTGAATTCCCACCTATATCGTCCCTTGACAAGTCCAAAGGCCACAAAATCTGTTCAGCTCCTGCTATGTTCACTAAGCAAGAATAAAAAAGCAAGAGATGAAATCCTTGTTGCGAGTATTTTGCTGTGTTTGTTTGTCCGCAGAAAACTGGCTCAGGAGGGAGACTTGAAAGATCCCGTCATCTTTAATGCCTGTTCTGTGTGTCACTGGACCATGATATCAAGACCATGGGAGTCGCATGAGGAGGGCAGGGGTGGGATCAAACCCCTTTCTCGTTTTCTGTGCAACATCTGCATTAGTGAGCAACCTGCACTTCAAAAAGCTGTCACCCGGATCTCAGGGAGATCCAGGTAGACAGAGTGCAGACAAGGTCAAAGTTTCTCAGCAAAGTCCTCATGTTCAAAAACACCAAGAGAAAGCAAGCAACACTTCGTCCACCTCCTGCAACTCCCCTGTACTCCTCTACCACCCTCCTCTCCTCTCCGGGAAATCTATAACATTTATTATTTACACATGCGCAGAGACAAAGAAACAGGTAGCTGAAAAAATGAAAAGAAAGCAGTTAAATAATTGAATGCTAGGCACCTTTAAAAAAGGGAGAATCTGGGTAAAAAAAAAAGAAAAGTAGGTCAGAAAAAGGGGGAAAAAAATAACATCAAAAAGAAAAACTTGCAACAAAGTAATATATACTGAAAGTATGCTCATGCAATGTTCAAAACGTATCACTCCGAACAAGCGCACATCATTTCAACACCACCTGCCCTCAACATCTCCACTTAAAAAAGGGTTAATACAAGACAAAAAAAACCCGTTGGAACACATATGCAATTCACGTGATTTCCTGATCTCATTCCCAGGTTAATATTCCTACTATGCAGTAAATTTTCTTGTCTCCAACATTCTGTGTATGTCCTCCTGATATACTATACTAGTTTAACACAATACCATGATTAAGTGTGGGTGAATTAAATTAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000310_03453336_03456200.mRNA True 2880 mRNA 0.40 5 3452711 3457834

Neighbor

gene id symbol gene type direction distance location
CI01000310_03383148_03399648 NA coding downstream 52756 3382936 ~ 3399955 (-)
CI01000310_03360602_03364078 NA coding downstream 88633 3360302 ~ 3364078 (-)
CI01000310_03175131_03188416 ZRANB1B, ZRANB1 coding downstream 262839 3174959 ~ 3189872 (-)
CI01000310_03162150_03164725 NA coding downstream 287874 3162128 ~ 3164837 (-)
CI01000310_03154723_03156202 NA coding downstream 296509 3154617 ~ 3156202 (-)
CI01000310_03684045_03685024 NA coding upstream 226171 3684005 ~ 3685024 (-)
CI01000310_03699595_03709303 EGLN3 coding upstream 241426 3699260 ~ 3709303 (-)
CI01000310_03715435_03742324 NA coding upstream 257194 3715028 ~ 3742531 (-)
CI01000310_03746266_03768717 BAZ1A coding upstream 288296 3746130 ~ 3768742 (-)
CI01000310_03872351_03873577 SSTR1, SSTR1A coding upstream 414496 3872330 ~ 3874259 (-)
G441423 NA non-coding downstream 260866 3191640 ~ 3191845 (-)
G441326 NA non-coding downstream 283243 3167069 ~ 3169468 (-)
G441333 NA non-coding downstream 389827 3062326 ~ 3062884 (-)
G441258 NA non-coding downstream 645453 2805377 ~ 2807258 (-)
G441562 NA non-coding upstream 177295 3635129 ~ 3638524 (-)
G441559 NA non-coding upstream 253647 3711481 ~ 3714830 (-)
G441605 NA non-coding upstream 328061 3785895 ~ 3791370 (-)
G441636 NA non-coding upstream 354490 3812324 ~ 3812618 (-)
G441639 NA non-coding upstream 358861 3816695 ~ 3816928 (-)
CI01000310_03135568_03137756 NA other downstream 315640 3134632 ~ 3137756 (-)
G441306 NA other downstream 625507 2826784 ~ 2827204 (-)
G439473 NA other downstream 2337878 1114360 ~ 1114833 (-)
G439398 NA other downstream 2511147 939135 ~ 941564 (-)
G439012 NA other downstream 3118657 332255 ~ 334054 (-)
G441618 NA other upstream 477545 3968183 ~ 4028466 (-)

Expression


Co-expression Network