CI01000310_03684045_03685024


Basic Information

Item Value
gene id CI01000310_03684045_03685024
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000310
NCBI id null
chromosome length 5141163
location 3684005 ~ 3685024 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000310_03684045_03685024.mRNA
AATTTATAACACTGTTAACACTGATACTAAGAGAATCCCCTTTCTCCCATATTCTTCTACTTGGCACCAAGTTCCTCATAAAAGAATCTGTATAATTGTACAAGAAATAGTTAAAAACACAGACACAGTCTTCACAGGGTCCTTGAAGTCAACAGGTTTGGTGGAAACCAATGAAATACACCCAATGCACAAGAGAAGCACAAGGGACTCTGGGAATGTTTCACATCTGAGGCTTTTGAGGTTCCAGTCTGCTAAATGCTACTTCAGTTTTTTTTTTATTCCTCATCACGTTTGAGCTGGAAACTGCAATCCCAGAATACCTCAGTGGCAAAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000310_03684045_03685024.mRNA True 335 mRNA 0.39 2 3684005 3685024

Neighbor

gene id symbol gene type direction distance location
CI01000310_03453336_03456200 NA coding downstream 226171 3452711 ~ 3457834 (-)
CI01000310_03383148_03399648 NA coding downstream 284050 3382936 ~ 3399955 (-)
CI01000310_03360602_03364078 NA coding downstream 319927 3360302 ~ 3364078 (-)
CI01000310_03175131_03188416 ZRANB1B, ZRANB1 coding downstream 494133 3174959 ~ 3189872 (-)
CI01000310_03162150_03164725 NA coding downstream 519168 3162128 ~ 3164837 (-)
CI01000310_03699595_03709303 EGLN3 coding upstream 14236 3699260 ~ 3709303 (-)
CI01000310_03715435_03742324 NA coding upstream 30004 3715028 ~ 3742531 (-)
CI01000310_03746266_03768717 BAZ1A coding upstream 61106 3746130 ~ 3768742 (-)
CI01000310_03872351_03873577 SSTR1, SSTR1A coding upstream 187306 3872330 ~ 3874259 (-)
CI01000310_03886430_03899284 TTC6 coding upstream 201375 3886399 ~ 3899284 (-)
G441562 NA non-coding downstream 45481 3635129 ~ 3638524 (-)
G441423 NA non-coding downstream 492160 3191640 ~ 3191845 (-)
G441326 NA non-coding downstream 514537 3167069 ~ 3169468 (-)
G441333 NA non-coding downstream 621121 3062326 ~ 3062884 (-)
G441559 NA non-coding upstream 26457 3711481 ~ 3714830 (-)
G441605 NA non-coding upstream 100871 3785895 ~ 3791370 (-)
G441636 NA non-coding upstream 127300 3812324 ~ 3812618 (-)
G441639 NA non-coding upstream 131671 3816695 ~ 3816928 (-)
G441640 NA non-coding upstream 132085 3817109 ~ 3817419 (-)
CI01000310_03135568_03137756 NA other downstream 546934 3134632 ~ 3137756 (-)
G441306 NA other downstream 856801 2826784 ~ 2827204 (-)
G439473 NA other downstream 2569172 1114360 ~ 1114833 (-)
G439398 NA other downstream 2742441 939135 ~ 941564 (-)
G439012 NA other downstream 3349951 332255 ~ 334054 (-)
G441618 NA other upstream 250355 3968183 ~ 4028466 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
rainbow trout (Oncorhynchus mykiss) LOC110497688 npas3 misc NC_048583.1 CM023237.2 32770921 ~ 33161896 (-)