G438847


Basic Information

Item Value
gene id G438847
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000310
NCBI id null
chromosome length 5141163
location 61585 ~ 61974 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU503666
GTGGTGACACAGGGACTTCGATGGGCAGTCCTGAACAGAAGAGTGAAGACCGTGTGTAGAGTATCCAGAGTGAAGGGAAAACACCAGGTGAGTAATCCAAACGGGACTGGAACCGGAACAGCACGACACGATGACTCAGACAGAGGAACACACAGGATAACAGGAAGCAGCACGGGCGATATCCAGCAACGATCTGACAAACATGGGACGAAAGACAGGGCAATAAATAGGCTGGTAGATGACATTCAGCTGCCGCTGATCACTGGTAATCAGCGGTGACGCCCACATGAAACAATCAGCGTGACGAACACACACACACACACACACACACACACACACACACAAACACACAAGACCAGAATGAGACAGCGGATTACCAACCGTGACAGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU503666 True 390 lncRNA 0.51 1 61585 61974

Neighbor

gene id symbol gene type direction distance location
CI01000310_00003244_00012743 NA coding upstream 48671 3244 ~ 12914 (+)
CI01000310_00138858_00147748 NA coding downstream 76573 138547 ~ 147755 (+)
CI01000310_00215248_00279025 SNTG2 coding downstream 153274 215248 ~ 279648 (+)
CI01000310_00298547_00317035 NA coding downstream 236573 298547 ~ 318355 (+)
CI01000310_00495852_00504711 NA coding downstream 433878 495852 ~ 504711 (+)
CI01000310_00513998_00524767 HAO1 coding downstream 452024 513998 ~ 525606 (+)
G438834 NA non-coding upstream 8126 53192 ~ 53459 (+)
G438832 NA non-coding upstream 11613 49772 ~ 49972 (+)
G438828 NA non-coding upstream 18051 42395 ~ 43534 (+)
G438825 NA non-coding upstream 25401 35891 ~ 36184 (+)
G438824 NA non-coding upstream 27793 33017 ~ 33792 (+)
G438881 NA non-coding downstream 72088 134062 ~ 134390 (+)
G438913 NA non-coding downstream 167822 229796 ~ 231369 (+)
G439052 NA non-coding downstream 354642 416616 ~ 419017 (+)
G439054 NA non-coding downstream 364738 426712 ~ 490523 (+)
CI01000310_00648731_00650082 NAPB other downstream 586592 648566 ~ 650159 (+)
G439115 NA other downstream 587984 651976 ~ 653356 (+)
CI01000310_01207513_01226750 CDC5L other downstream 1160032 1207057 ~ 1227194 (+)
CI01000310_01508712_01511125 FAM167A other downstream 1439912 1508341 ~ 1513341 (+)
G439845 NA other downstream 1849627 1911601 ~ 1912417 (+)

Expression


Co-expression Network