G438881


Basic Information

Item Value
gene id G438881
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000310
NCBI id null
chromosome length 5141163
location 134062 ~ 134390 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU503701
GACATCTGACTGCTAAGTGGGATTTGTGTTTTCGGCAATAGTGTACCCTTACTTTACTGAGAAAAGAAGGTCAGGGAAAAATCTGTAAATGGAAAATCTCCATAGTGCCTTTTTGCATTTTTTTTTTTTACTTGTTACTTTGCACTTTTTTAGAAAATATTTACCATTTATTCAAGTTTATTTAGGATATTACATAGGCCTACTTGCATTATTATGCTGTTATATTATGATTATATATTCAGTGGAATAAAATGGTCTTAAAATGACAATATTATCGTTTATCGCAATTATTTCTGAAACAATATATCGCACAACAAAAAGTAGTTATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU503701 True 329 lncRNA 0.29 1 134062 134390

Neighbor

gene id symbol gene type direction distance location
CI01000310_00003244_00012743 NA coding upstream 121148 3244 ~ 12914 (+)
CI01000310_00138858_00147748 NA coding downstream 4157 138547 ~ 147755 (+)
CI01000310_00215248_00279025 SNTG2 coding downstream 80858 215248 ~ 279648 (+)
CI01000310_00298547_00317035 NA coding downstream 164157 298547 ~ 318355 (+)
CI01000310_00495852_00504711 NA coding downstream 361462 495852 ~ 504711 (+)
CI01000310_00513998_00524767 HAO1 coding downstream 379608 513998 ~ 525606 (+)
G438847 NA non-coding upstream 72088 61585 ~ 61974 (+)
G438834 NA non-coding upstream 80603 53192 ~ 53459 (+)
G438832 NA non-coding upstream 84090 49772 ~ 49972 (+)
G438828 NA non-coding upstream 90528 42395 ~ 43534 (+)
G438825 NA non-coding upstream 97878 35891 ~ 36184 (+)
G438913 NA non-coding downstream 95406 229796 ~ 231369 (+)
G439052 NA non-coding downstream 282226 416616 ~ 419017 (+)
G439054 NA non-coding downstream 292322 426712 ~ 490523 (+)
G439072 NA non-coding downstream 364383 498773 ~ 500118 (+)
CI01000310_00648731_00650082 NAPB other downstream 514176 648566 ~ 650159 (+)
G439115 NA other downstream 515568 651976 ~ 653356 (+)
CI01000310_01207513_01226750 CDC5L other downstream 1087616 1207057 ~ 1227194 (+)
CI01000310_01508712_01511125 FAM167A other downstream 1367496 1508341 ~ 1513341 (+)
G439845 NA other downstream 1777211 1911601 ~ 1912417 (+)

Expression


Co-expression Network