Gene
RNA
| Item | Value |
|---|---|
| gene id | G439197 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000310 |
| NCBI id | null |
| chromosome length | 5141163 |
| location | 508793 ~ 509500 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU504088 | True | 585 | lncRNA | 0.36 | 2 | 508793 | 509500 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000310_00415541_00454442 | PLCB1 | coding | downstream | 54351 | 415281 ~ 454442 (-) |
| CI01000310_00369180_00401704 | NA | coding | downstream | 106931 | 368560 ~ 401862 (-) |
| CI01000310_00151988_00156136 | TMEM151B, TMEM151BB | coding | downstream | 352657 | 150614 ~ 156136 (-) |
| CI01000310_00083324_00113068 | NA | coding | downstream | 395687 | 81228 ~ 113106 (-) |
| CI01000310_00032999_00038804 | NA | coding | downstream | 469663 | 32950 ~ 39130 (-) |
| CI01000310_00593564_00595487 | BMP2, BMP2A | coding | upstream | 84026 | 593526 ~ 595937 (-) |
| CI01000310_00597640_00601450 | GDF3 | coding | upstream | 88005 | 597505 ~ 601575 (-) |
| CI01000310_00631552_00635392 | CRLS1 | coding | upstream | 121784 | 631284 ~ 635392 (-) |
| CI01000310_00637385_00645599 | MCM8 | coding | upstream | 127485 | 636985 ~ 645599 (-) |
| CI01000310_00762106_00777075 | KCNK10B, KCNK10 | coding | upstream | 252339 | 761839 ~ 777075 (-) |
| G438947 | NA | non-coding | downstream | 371175 | 137274 ~ 137618 (-) |
| G438946 | NA | non-coding | downstream | 371718 | 136617 ~ 137075 (-) |
| G438945 | NA | non-coding | downstream | 372315 | 136160 ~ 136478 (-) |
| G438859 | NA | non-coding | downstream | 430155 | 77762 ~ 78638 (-) |
| G439240 | NA | non-coding | upstream | 105998 | 615498 ~ 615756 (-) |
| G439244 | NA | non-coding | upstream | 112906 | 622406 ~ 622607 (-) |
| G439248 | NA | non-coding | upstream | 137864 | 647364 ~ 648163 (-) |
| G439250 | NA | non-coding | upstream | 139065 | 648565 ~ 649861 (-) |
| G439258 | NA | non-coding | upstream | 190093 | 699593 ~ 699921 (-) |
| G439012 | NA | other | downstream | 174739 | 332255 ~ 334054 (-) |
| G439398 | NA | other | upstream | 429635 | 939135 ~ 941564 (-) |
| G439473 | NA | other | upstream | 604860 | 1114360 ~ 1114833 (-) |
| G441306 | NA | other | upstream | 2317284 | 2826784 ~ 2827204 (-) |
| CI01000310_03135568_03137756 | NA | other | upstream | 2625132 | 3134632 ~ 3137756 (-) |
| CI01000310_03715435_03742324 | NA | other | upstream | 3228592 | 3715028 ~ 3742531 (-) |
