G439111


Basic Information

Item Value
gene id G439111
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000310
NCBI id null
chromosome length 5141163
location 610436 ~ 610741 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU503975
TACATTGTTCAAATCGGAGTCGACACTGATGGAGAGACTCAGGAAGAAGTTACAACTTTTAGAATGAAACTGGACGTTTCTGAATGGTTAGTGGACAAATTTATGTAGTTGCTGTGGAGTTGATTCAACTCATCGACTAACATGTGCTGTCATGTTAATCTTTTTTCATTGAATTGACCCTCGTTTGTGAAGCAGTCCAGTGTAAAATGACGGCATGGCAACAACACTCTACTACAACAACTCTTCCTCTTCTCTAAAGCAGCCCAACATGGCCTCACCACCTTTGTTGTGTGTTCTTGGGGGCGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU503975 True 306 lncRNA 0.42 1 610436 610741

Neighbor

gene id symbol gene type direction distance location
CI01000310_00513998_00524767 HAO1 coding upstream 84830 513998 ~ 525606 (+)
CI01000310_00495852_00504711 NA coding upstream 105725 495852 ~ 504711 (+)
CI01000310_00298547_00317035 NA coding upstream 292081 298547 ~ 318355 (+)
CI01000310_00215248_00279025 SNTG2 coding upstream 330788 215248 ~ 279648 (+)
CI01000310_00138858_00147748 NA coding upstream 462681 138547 ~ 147755 (+)
CI01000310_00629492_00629967 NA coding downstream 18751 629492 ~ 630832 (+)
CI01000310_00648731_00650082 NAPB coding downstream 37990 648566 ~ 650159 (+)
CI01000310_00653504_00679039 NA coding downstream 42763 653504 ~ 679039 (+)
CI01000310_00691123_00696889 NA coding downstream 80382 691123 ~ 697281 (+)
CI01000310_00717405_00718485 BDKRB2 coding downstream 106664 717405 ~ 718563 (+)
G439072 NA non-coding upstream 110318 498773 ~ 500118 (+)
G439054 NA non-coding upstream 119913 426712 ~ 490523 (+)
G439052 NA non-coding upstream 191419 416616 ~ 419017 (+)
G438913 NA non-coding upstream 379067 229796 ~ 231369 (+)
G439135 NA non-coding downstream 88874 699615 ~ 699921 (+)
G439141 NA non-coding downstream 92907 703648 ~ 748971 (+)
G439134 NA non-coding downstream 104773 715514 ~ 746104 (+)
G439138 NA non-coding downstream 141529 752270 ~ 752679 (+)
G439148 NA non-coding downstream 145598 756339 ~ 756796 (+)
G439115 NA other downstream 39217 651976 ~ 653356 (+)
CI01000310_01207513_01226750 CDC5L other downstream 611265 1207057 ~ 1227194 (+)
CI01000310_01508712_01511125 FAM167A other downstream 891145 1508341 ~ 1513341 (+)
G439845 NA other downstream 1300860 1911601 ~ 1912417 (+)

Expression


Co-expression Network