G439148


Basic Information

Item Value
gene id G439148
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000310
NCBI id null
chromosome length 5141163
location 756339 ~ 756796 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU504029
GATTATGTTATGTTAGCTACTTCACAAAATAGTGTTTTTCTCTGAGGCATGGTAAAGCATGGTACTCGCAAAAAAATCAAGAAAATTAGATTTAAACAATAAGACTAAACGTGTTGAGCTATATAACAACAATTAGTTTTCTGTCTATAAATATATCAAAACAGTTGTTCCCTTGTCTATTAAAAAGTGTAATATATTAAAGCGTCTTTGGTGTTTCCATGGTTTCTACAAAATAAAACCGGAAACCGAGGCAGAACGAGGGTAACGCGGGTATGACGCAATTGACAGGCGACTCCTCACACGTCCCGGAGCCTTGGTTAAAATTGCAATTTTCTCACGATTTACAAATAGTTGGAAACATTTGGGATATTGTAAGTACTCAAGTTAACAAAATATATAACACTGGCCTAGTGGTTTTTGAATATTTCACTGCAAAAATATTACATATTGCACCTTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU504029 True 458 lncRNA 0.34 1 756339 756796

Neighbor

gene id symbol gene type direction distance location
CI01000310_00744256_00746991 NA coding upstream 9234 743378 ~ 747105 (+)
CI01000310_00738120_00739067 NA coding upstream 16524 737918 ~ 739815 (+)
CI01000310_00721054_00727169 BDKRB1 coding upstream 27027 720837 ~ 729312 (+)
CI01000310_00717405_00718485 BDKRB2 coding upstream 37776 717405 ~ 718563 (+)
CI01000310_00691123_00696889 NA coding upstream 59058 691123 ~ 697281 (+)
CI01000310_00784238_00790497 NA coding downstream 27442 784238 ~ 791969 (+)
CI01000310_00861939_01046631 KLHL29 coding downstream 105143 861939 ~ 1046631 (+)
CI01000310_01103452_01164843 NA coding downstream 345081 1101821 ~ 1164974 (+)
CI01000310_01196439_01199290 NA coding downstream 438904 1195700 ~ 1199377 (+)
CI01000310_01207513_01226750 CDC5L coding downstream 450261 1207057 ~ 1227194 (+)
G439138 NA non-coding upstream 3660 752270 ~ 752679 (+)
G439141 NA non-coding upstream 7368 703648 ~ 748971 (+)
G439134 NA non-coding upstream 10235 715514 ~ 746104 (+)
G439135 NA non-coding upstream 56418 699615 ~ 699921 (+)
G439111 NA non-coding upstream 145598 610436 ~ 610741 (+)
G439289 NA non-coding downstream 35877 792673 ~ 794492 (+)
G439298 NA non-coding downstream 163472 920268 ~ 923911 (+)
G439300 NA non-coding downstream 298751 1055547 ~ 1056332 (+)
G439457 NA non-coding downstream 338290 1095086 ~ 1095662 (+)
G439115 NA other upstream 65147 651976 ~ 653356 (+)
CI01000310_00648731_00650082 NAPB other upstream 106786 648566 ~ 650159 (+)
CI01000310_01508712_01511125 FAM167A other downstream 745090 1508341 ~ 1513341 (+)
G439845 NA other downstream 1154805 1911601 ~ 1912417 (+)
G440505 NA other downstream 2342621 3099417 ~ 3136328 (+)

Expression


Co-expression Network