Gene
RNA
| Item | Value |
|---|---|
| gene id | G439416 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000310 |
| NCBI id | null |
| chromosome length | 5141163 |
| location | 980334 ~ 1023679 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU504374 | True | 649 | lncRNA | 0.40 | 2 | 980334 | 1023679 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000310_00762106_00777075 | KCNK10B, KCNK10 | coding | downstream | 203259 | 761839 ~ 777075 (-) |
| CI01000310_00637385_00645599 | MCM8 | coding | downstream | 334735 | 636985 ~ 645599 (-) |
| CI01000310_00631552_00635392 | CRLS1 | coding | downstream | 344942 | 631284 ~ 635392 (-) |
| CI01000310_00597640_00601450 | GDF3 | coding | downstream | 378759 | 597505 ~ 601575 (-) |
| CI01000310_00593564_00595487 | BMP2, BMP2A | coding | downstream | 384397 | 593526 ~ 595937 (-) |
| CI01000310_01278443_01278823 | NA | coding | upstream | 254270 | 1277949 ~ 1279008 (-) |
| CI01000310_01288093_01294540 | NA | coding | upstream | 264371 | 1288050 ~ 1294540 (-) |
| CI01000310_01301239_01302430 | NA | coding | upstream | 276883 | 1300562 ~ 1302604 (-) |
| CI01000310_01381159_01387513 | NA | coding | upstream | 357202 | 1380881 ~ 1388410 (-) |
| CI01000310_01481888_01490264 | CLIC4, CLIC5, CLIC5A, CLIC5B | coding | upstream | 457717 | 1481396 ~ 1490555 (-) |
| G439328 | NA | non-coding | downstream | 102293 | 795226 ~ 878041 (-) |
| G439283 | NA | non-coding | downstream | 220986 | 759102 ~ 759348 (-) |
| G439281 | NA | non-coding | downstream | 222117 | 758001 ~ 758217 (-) |
| G439279 | NA | non-coding | downstream | 223152 | 756957 ~ 757182 (-) |
| G439278 | NA | non-coding | downstream | 223762 | 756350 ~ 756572 (-) |
| G439442 | NA | non-coding | upstream | 30767 | 1054446 ~ 1054781 (-) |
| G439443 | NA | non-coding | upstream | 31728 | 1055407 ~ 1055627 (-) |
| G439444 | NA | non-coding | upstream | 32176 | 1055855 ~ 1056384 (-) |
| G439445 | NA | non-coding | upstream | 34277 | 1057956 ~ 1058278 (-) |
| G439448 | NA | non-coding | upstream | 38539 | 1062218 ~ 1062689 (-) |
| G439398 | NA | other | downstream | 38770 | 939135 ~ 941564 (-) |
| G439012 | NA | other | downstream | 646280 | 332255 ~ 334054 (-) |
| G439473 | NA | other | upstream | 90681 | 1114360 ~ 1114833 (-) |
| G441306 | NA | other | upstream | 1803105 | 2826784 ~ 2827204 (-) |
| CI01000310_03135568_03137756 | NA | other | upstream | 2110953 | 3134632 ~ 3137756 (-) |
| CI01000310_03715435_03742324 | NA | other | upstream | 2714413 | 3715028 ~ 3742531 (-) |
| G441605 | NA | other | upstream | 2762216 | 3785895 ~ 3791370 (-) |
