G439300


Basic Information

Item Value
gene id G439300
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000310
NCBI id null
chromosome length 5141163
location 1055547 ~ 1056332 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU504246
ATACTTTTTGTGTGCAAAAACAAAACAAAAATAACGAATTTATTCAACAATTTGAACCATAGTGAACTCAGTGCAGGCTTCATTGTTTACGTCCGAATGACTATTTTAACCATGTTTTTAACTACTGTAGCAAATTAGCTCAAAATAAATATGAATAATTAATCATAACTAGTTATAATTAATTATAAATATTTGGATCAGTTAATAAAATTAACTTTATGTAATAAAATTAATATTACAATCAATTAACCTGTTGTCCAATGAACACACATTGTTAATTGTTTATTAATTCTAAGAAATGTTCATTTCCAGGTTATGGGAAATAACAATCTTATTGTACAGTACTACTCAGAGCCTGTAGTCAGGATCTGCATGAATAGGGACTCCAGTATATGAGCGTGAAACACGGACAACTTTACGTGTGACATGAACAAGACTTTATTAACTAGACTAAACACTTAATTACTCTAACATTCACACACATACATGCATACAGTTTACCAAGGGAAAGAGAGAGTTGAAGCAGAGTATAGGAAAGCAAGAAGTTACAGCATTGTTTGAAATTCAGCAGATCAACAGCCTTGAGCAAACCATCAGTTTAGTTTTAACAGGCCCTTCTTTAAAAGGGGTAAGGATATTCAATGTATCAGATAATGAGACTAAGTTTGATACTTGCATGTCTCTCCAAGTTAAATTAAAACTGTCCTGATGCGATTTGTGGAGGCTCCCGTTGAATCTTTGCTGATATTGTCTTGATGAAAGAGAACCAGTTGGATTCAGAGGACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU504246 True 786 lncRNA 0.33 1 1055547 1056332

Neighbor

gene id symbol gene type direction distance location
CI01000310_00861939_01046631 KLHL29 coding upstream 8916 861939 ~ 1046631 (+)
CI01000310_00784238_00790497 NA coding upstream 263653 784238 ~ 791969 (+)
CI01000310_00744256_00746991 NA coding upstream 308442 743378 ~ 747105 (+)
CI01000310_00738120_00739067 NA coding upstream 315732 737918 ~ 739815 (+)
CI01000310_00721054_00727169 BDKRB1 coding upstream 326235 720837 ~ 729312 (+)
CI01000310_01103452_01164843 NA coding downstream 45545 1101821 ~ 1164974 (+)
CI01000310_01196439_01199290 NA coding downstream 139368 1195700 ~ 1199377 (+)
CI01000310_01207513_01226750 CDC5L coding downstream 150725 1207057 ~ 1227194 (+)
CI01000310_01257447_01269508 NA coding downstream 200995 1257327 ~ 1270033 (+)
CI01000310_01394296_01394727 NA coding downstream 336757 1393089 ~ 1394908 (+)
G439298 NA non-coding upstream 131636 920268 ~ 923911 (+)
G439289 NA non-coding upstream 261055 792673 ~ 794492 (+)
G439148 NA non-coding upstream 298751 756339 ~ 756796 (+)
G439138 NA non-coding upstream 302868 752270 ~ 752679 (+)
G439457 NA non-coding downstream 38754 1095086 ~ 1095662 (+)
G439456 NA non-coding downstream 39823 1096155 ~ 1096516 (+)
G439486 NA non-coding downstream 71298 1127630 ~ 1127866 (+)
G439505 NA non-coding downstream 92279 1148611 ~ 1148956 (+)
G439115 NA other upstream 364355 651976 ~ 653356 (+)
CI01000310_00648731_00650082 NAPB other upstream 405994 648566 ~ 650159 (+)
CI01000310_01508712_01511125 FAM167A other downstream 445554 1508341 ~ 1513341 (+)
G439845 NA other downstream 855269 1911601 ~ 1912417 (+)
G440505 NA other downstream 2043085 3099417 ~ 3136328 (+)

Expression


Co-expression Network