G439457


Basic Information

Item Value
gene id G439457
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000310
NCBI id null
chromosome length 5141163
location 1095086 ~ 1095662 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU504442
CGGCAAGTCCGGGACCAATTGCCCCATTGGCACCTTTGTTACCCCAGTAAAGAAAAACAGAACATATTCTCACCAGCTCCAGGGACTTCAAAGAGTCACCCTGGTGGGGCTAAGGGTCATGTGGTCACAGACACTGGCCACAACCCCAATACACACACACATACAGACACTCACAAACACGCATGGAGATTGTGAATATACATTTATCCTCCAAATATGACTGTGCCAAAGTGTACCCGTCGTTGAGTTCAAGGTACACGTATGTATCCCTAGTATAGAAGCTTAGCTATGACTGTAGTTGTATTAGTTTTATTCTAAACGATAAAACTCAAGTATAAACTGTATCTCCCCTTTTATGTCTTTGCCATCTGACAAGTTTGGTCTCATTGTAAAGCTTTTGTTATGCTCTAATTGAAAATGTATGTCACACGACTGTAAAATGCATTCTTCTATTTTTAATGGTACTTTGAAGAAAATGTACTCAGATCTGACACTTCATAAACCATGCAAATTAGGTCATAAATGGAGACAAAGAAAAAGTTTGCTCGCCAAAATCGCACCCTCATCATTGGCTGAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU504442 True 577 lncRNA 0.40 1 1095086 1095662

Neighbor

gene id symbol gene type direction distance location
CI01000310_00861939_01046631 KLHL29 coding upstream 48455 861939 ~ 1046631 (+)
CI01000310_00784238_00790497 NA coding upstream 303192 784238 ~ 791969 (+)
CI01000310_00744256_00746991 NA coding upstream 347981 743378 ~ 747105 (+)
CI01000310_00738120_00739067 NA coding upstream 355271 737918 ~ 739815 (+)
CI01000310_00721054_00727169 BDKRB1 coding upstream 365774 720837 ~ 729312 (+)
CI01000310_01103452_01164843 NA coding downstream 6215 1101821 ~ 1164974 (+)
CI01000310_01196439_01199290 NA coding downstream 100038 1195700 ~ 1199377 (+)
CI01000310_01207513_01226750 CDC5L coding downstream 111395 1207057 ~ 1227194 (+)
CI01000310_01257447_01269508 NA coding downstream 161665 1257327 ~ 1270033 (+)
CI01000310_01394296_01394727 NA coding downstream 297427 1393089 ~ 1394908 (+)
G439300 NA non-coding upstream 38754 1055547 ~ 1056332 (+)
G439298 NA non-coding upstream 171175 920268 ~ 923911 (+)
G439289 NA non-coding upstream 300594 792673 ~ 794492 (+)
G439148 NA non-coding upstream 338290 756339 ~ 756796 (+)
G439456 NA non-coding downstream 493 1096155 ~ 1096516 (+)
G439486 NA non-coding downstream 31968 1127630 ~ 1127866 (+)
G439505 NA non-coding downstream 52949 1148611 ~ 1148956 (+)
G439507 NA non-coding downstream 55078 1150740 ~ 1151020 (+)
G439115 NA other upstream 403894 651976 ~ 653356 (+)
CI01000310_00648731_00650082 NAPB other upstream 445533 648566 ~ 650159 (+)
CI01000310_01508712_01511125 FAM167A other downstream 406224 1508341 ~ 1513341 (+)
G439845 NA other downstream 815939 1911601 ~ 1912417 (+)
G440505 NA other downstream 2003755 3099417 ~ 3136328 (+)

Expression


Co-expression Network