G439565


Basic Information

Item Value
gene id G439565
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000310
NCBI id null
chromosome length 5141163
location 1261346 ~ 1261761 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU504569
GAGATAGTGACTTTAATAAAGTAGTCTACCATCACAAGACAGACAAAATTATTAAGGGTTCTTAATTTCTTGTTGACAAACAATAATAAAAAAAAAAAATATTAAAAATATGAAAAATAAATAAAGGTTTAATCACAGAACATATTTTATTTCAAGAGTTTTAACCTAAAAAATGAAATGAAATCCTCTAAATCCAAATAAAAATGAATACAAAAGCAAGATATTACACTTGAAAAAATAAAGTATTACAACATCATGAATAATGGGACATTCCTGATGAAGAAAGACAAAAAAATAATTAAACATCAGAATGTAACTTCTACAGATCATCAACAAAAAAAAAAAAAAAAAAAANNNNNN

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU504569 True 360 lncRNA 0.22 2 1261346 1261761

Neighbor

gene id symbol gene type direction distance location
CI01000310_01207513_01226750 CDC5L coding upstream 34174 1207057 ~ 1227194 (+)
CI01000310_01196439_01199290 NA coding upstream 61969 1195700 ~ 1199377 (+)
CI01000310_01103452_01164843 NA coding upstream 96372 1101821 ~ 1164974 (+)
CI01000310_00861939_01046631 KLHL29 coding upstream 214715 861939 ~ 1046631 (+)
CI01000310_00784238_00790497 NA coding upstream 469452 784238 ~ 791969 (+)
CI01000310_01394296_01394727 NA coding downstream 131328 1393089 ~ 1394908 (+)
CI01000310_01411744_01412226 NA coding downstream 149983 1411744 ~ 1412467 (+)
CI01000310_01414325_01452698 RUNX2, RUNX2A coding downstream 152564 1414325 ~ 1452698 (+)
CI01000310_01508712_01511125 FAM167A coding downstream 246951 1508341 ~ 1513341 (+)
CI01000310_01513690_01517791 NA coding downstream 251929 1513690 ~ 1518229 (+)
G439541 NA non-coding upstream 63276 1197604 ~ 1198070 (+)
G439519 NA non-coding upstream 98190 1162939 ~ 1163156 (+)
G439511 NA non-coding upstream 105583 1155294 ~ 1155763 (+)
G439507 NA non-coding upstream 110326 1150740 ~ 1151020 (+)
G439505 NA non-coding upstream 112390 1148611 ~ 1148956 (+)
G439628 NA non-coding downstream 96137 1357898 ~ 1367503 (+)
G439631 NA non-coding downstream 103870 1365631 ~ 1366429 (+)
G439657 NA non-coding downstream 145946 1407707 ~ 1410605 (+)
G439679 NA non-coding downstream 260977 1522738 ~ 1523826 (+)
G439704 NA non-coding downstream 300560 1562321 ~ 1562554 (+)
G439115 NA other upstream 570154 651976 ~ 653356 (+)
CI01000310_00648731_00650082 NAPB other upstream 611793 648566 ~ 650159 (+)
G439845 NA other downstream 649840 1911601 ~ 1912417 (+)
G440505 NA other downstream 1837656 3099417 ~ 3136328 (+)

Expression


Co-expression Network