G440423



Basic Information


Item Value
gene id G440423
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000310
NCBI id null
chromosome length 5141163
location 2657601 ~ 2657838 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU505617
TGGAACCTCATTATTTTATTTGGTAATTTTCATGTAGATATAAGCAAATCTAAAGCACGTTGCAATATATAACCAAGTTTGTTATGTTTGTTCTCTTAAATATGTGAAAAATAAGAAATCGAGATAAACAATTTCACACCATAAAGAGATACATAGGATTTGAAAGTGCGGTCATTTGGCTATTTGTTTGTTTGTGTCCTTTCATTTAGCTTTTTTTGATAATTACTATATATTGAAC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU505617 True 238 lncRNA 0.28 1 2657601 2657838

Neighbor


gene id symbol gene type direction distance location
CI01000310_02639022_02649415 NA coding upstream 7935 2639022 ~ 2649666 (+)
CI01000310_02572928_02575251 FBXO30A, FBXO30 coding upstream 82245 2572928 ~ 2575356 (+)
CI01000310_02562834_02569144 NA coding upstream 88344 2562389 ~ 2569257 (+)
CI01000310_02549824_02559417 SHPRH coding upstream 98110 2549824 ~ 2559491 (+)
CI01000310_02482727_02513419 KCNK5, KCNK5A coding upstream 143822 2482069 ~ 2513779 (+)
CI01000310_02658724_02665972 CCDC170 coding downstream 886 2658724 ~ 2666179 (+)
CI01000310_02789811_02790561 MYCT1B, MYCT1 coding downstream 131692 2789530 ~ 2791080 (+)
CI01000310_02793777_02805490 TULP4 coding downstream 135939 2793777 ~ 2807092 (+)
CI01000310_02810800_02814032 SLC18B1 coding downstream 152471 2810309 ~ 2814084 (+)
CI01000310_02823791_02825399 NA coding downstream 164799 2822637 ~ 2825761 (+)
G440401 NA non-coding upstream 4207 2652439 ~ 2653394 (+)
G440420 NA non-coding upstream 22140 2635200 ~ 2635461 (+)
G440419 NA non-coding upstream 24402 2632896 ~ 2633199 (+)
G440383 NA non-coding upstream 113526 2543873 ~ 2544075 (+)
G440427 NA non-coding downstream 17462 2675300 ~ 2676499 (+)
G440472 NA non-coding downstream 168911 2826749 ~ 2827136 (+)
G440477 NA non-coding downstream 188085 2845923 ~ 2847548 (+)
G440483 NA non-coding downstream 197158 2854996 ~ 2855588 (+)
G440623 NA non-coding downstream 391672 3049510 ~ 3049788 (+)
G439845 NA other upstream 745184 1911601 ~ 1912417 (+)
CI01000310_01508712_01511125 FAM167A other upstream 1144260 1508341 ~ 1513341 (+)
CI01000310_01207513_01226750 CDC5L other upstream 1418196 1207057 ~ 1227194 (+)
G439115 NA other upstream 1966409 651976 ~ 653356 (+)
CI01000310_00648731_00650082 NAPB other upstream 2008048 648566 ~ 650159 (+)
G440505 NA other downstream 441579 3099417 ~ 3136328 (+)

Expression



Co-expression Network