G440472


Basic Information

Item Value
gene id G440472
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000310
NCBI id null
chromosome length 5141163
location 2826749 ~ 2827136 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU505687
TGAATTACTGCAGCAATGCGGCGTGGCATGGAGTCGATCAGTCTGTGGCACTGCTCAGGTGTTATAAGAGCCCAGGTTGCTCTGATAGTGGCCTTCAGCTCTTCTGCATTGTTGGGTCTGGCATATCGCATCTTCCTCTTCACAATACCCCATAGATTTTCTATGGGGTTAAGGTCAGGCGAGTTTGCTGGCCAATTAAGAACAGGGATACCATGGTCCTTAAACCAGGTACTGGTAGCTTTAGCACTGTGTGCAGGTGCCAAGTCCTGTTGGAAAATGAAATCTGCATCTCCATAAAGTTGGTCAGCAGCAGGAAGCATGAAGTGCTCTAAAACTTCCTGGTATACGGCTGCGTTGACCTTGGACCTCAGAAAACACAGTGGACCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU505687 True 388 lncRNA 0.48 1 2826749 2827136

Neighbor

gene id symbol gene type direction distance location
CI01000310_02823791_02825399 NA coding upstream 988 2822637 ~ 2825761 (+)
CI01000310_02810800_02814032 SLC18B1 coding upstream 12665 2810309 ~ 2814084 (+)
CI01000310_02793777_02805490 TULP4 coding upstream 19657 2793777 ~ 2807092 (+)
CI01000310_02789811_02790561 MYCT1B, MYCT1 coding upstream 35669 2789530 ~ 2791080 (+)
CI01000310_02658724_02665972 CCDC170 coding upstream 160570 2658724 ~ 2666179 (+)
CI01000310_02861303_02864477 NA coding downstream 33439 2860575 ~ 2865057 (+)
CI01000310_02876181_02939106 CDC42BPA coding downstream 49045 2876181 ~ 2939106 (+)
CI01000310_03054431_03066827 EDRF1 coding downstream 227295 3054431 ~ 3067384 (+)
CI01000310_03069663_03095555 TONSL coding downstream 242399 3069535 ~ 3095888 (+)
CI01000310_03165171_03170431 PSMC1B, PSMC1, PSMC1A, PSMC1.L coding downstream 337801 3164937 ~ 3170431 (+)
G440427 NA non-coding upstream 150250 2675300 ~ 2676499 (+)
G440423 NA non-coding upstream 168911 2657601 ~ 2657838 (+)
G440401 NA non-coding upstream 173355 2652439 ~ 2653394 (+)
G440420 NA non-coding upstream 191288 2635200 ~ 2635461 (+)
G440419 NA non-coding upstream 193550 2632896 ~ 2633199 (+)
G440477 NA non-coding downstream 18787 2845923 ~ 2847548 (+)
G440483 NA non-coding downstream 27860 2854996 ~ 2855588 (+)
G440623 NA non-coding downstream 222374 3049510 ~ 3049788 (+)
G440533 NA non-coding downstream 268855 3095991 ~ 3098488 (+)
G440546 NA non-coding downstream 319098 3146234 ~ 3177391 (+)
G439845 NA other upstream 914332 1911601 ~ 1912417 (+)
CI01000310_01508712_01511125 FAM167A other upstream 1313408 1508341 ~ 1513341 (+)
CI01000310_01207513_01226750 CDC5L other upstream 1587344 1207057 ~ 1227194 (+)
G439115 NA other upstream 2135557 651976 ~ 653356 (+)
CI01000310_00648731_00650082 NAPB other upstream 2177196 648566 ~ 650159 (+)
G440505 NA other downstream 272281 3099417 ~ 3136328 (+)

Expression


Co-expression Network