Gene
RNA
| Item | Value |
|---|---|
| gene id | G440477 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000310 |
| NCBI id | null |
| chromosome length | 5141163 |
| location | 2845923 ~ 2847548 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU505696 | True | 207 | lncRNA | 0.44 | 3 | 2845923 | 2847548 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000310_02823791_02825399 | NA | coding | upstream | 20162 | 2822637 ~ 2825761 (+) |
| CI01000310_02810800_02814032 | SLC18B1 | coding | upstream | 31839 | 2810309 ~ 2814084 (+) |
| CI01000310_02793777_02805490 | TULP4 | coding | upstream | 38831 | 2793777 ~ 2807092 (+) |
| CI01000310_02789811_02790561 | MYCT1B, MYCT1 | coding | upstream | 54843 | 2789530 ~ 2791080 (+) |
| CI01000310_02658724_02665972 | CCDC170 | coding | upstream | 179744 | 2658724 ~ 2666179 (+) |
| CI01000310_02861303_02864477 | NA | coding | downstream | 13027 | 2860575 ~ 2865057 (+) |
| CI01000310_02876181_02939106 | CDC42BPA | coding | downstream | 28633 | 2876181 ~ 2939106 (+) |
| CI01000310_03054431_03066827 | EDRF1 | coding | downstream | 206883 | 3054431 ~ 3067384 (+) |
| CI01000310_03069663_03095555 | TONSL | coding | downstream | 221987 | 3069535 ~ 3095888 (+) |
| CI01000310_03165171_03170431 | PSMC1B, PSMC1, PSMC1A, PSMC1.L | coding | downstream | 317389 | 3164937 ~ 3170431 (+) |
| G440472 | NA | non-coding | upstream | 18787 | 2826749 ~ 2827136 (+) |
| G440427 | NA | non-coding | upstream | 169424 | 2675300 ~ 2676499 (+) |
| G440423 | NA | non-coding | upstream | 188085 | 2657601 ~ 2657838 (+) |
| G440401 | NA | non-coding | upstream | 192529 | 2652439 ~ 2653394 (+) |
| G440420 | NA | non-coding | upstream | 210462 | 2635200 ~ 2635461 (+) |
| G440483 | NA | non-coding | downstream | 7448 | 2854996 ~ 2855588 (+) |
| G440623 | NA | non-coding | downstream | 201962 | 3049510 ~ 3049788 (+) |
| G440533 | NA | non-coding | downstream | 248443 | 3095991 ~ 3098488 (+) |
| G440546 | NA | non-coding | downstream | 298686 | 3146234 ~ 3177391 (+) |
| G440659 | NA | non-coding | downstream | 345139 | 3192687 ~ 3192887 (+) |
| G439845 | NA | other | upstream | 933506 | 1911601 ~ 1912417 (+) |
| CI01000310_01508712_01511125 | FAM167A | other | upstream | 1332582 | 1508341 ~ 1513341 (+) |
| CI01000310_01207513_01226750 | CDC5L | other | upstream | 1606518 | 1207057 ~ 1227194 (+) |
| G439115 | NA | other | upstream | 2154731 | 651976 ~ 653356 (+) |
| CI01000310_00648731_00650082 | NAPB | other | upstream | 2196370 | 648566 ~ 650159 (+) |
| G440505 | NA | other | downstream | 251869 | 3099417 ~ 3136328 (+) |
