Gene
RNA
| Item | Value |
|---|---|
| gene id | G440505 |
| gene name | NA |
| gene type | unknown |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000310 |
| NCBI id | null |
| chromosome length | 5141163 |
| location | 3099417 ~ 3136328 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU505742 | True | 6410 | TUCP | 0.42 | 7 | 3099417 | 3136328 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000310_03069663_03095555 | TONSL | coding | upstream | 3529 | 3069535 ~ 3095888 (+) |
| CI01000310_03054431_03066827 | EDRF1 | coding | upstream | 32033 | 3054431 ~ 3067384 (+) |
| CI01000310_02876181_02939106 | CDC42BPA | coding | upstream | 160311 | 2876181 ~ 2939106 (+) |
| CI01000310_02861303_02864477 | NA | coding | upstream | 234360 | 2860575 ~ 2865057 (+) |
| CI01000310_02823791_02825399 | NA | coding | upstream | 273656 | 2822637 ~ 2825761 (+) |
| CI01000310_03165171_03170431 | PSMC1B, PSMC1, PSMC1A, PSMC1.L | coding | downstream | 28609 | 3164937 ~ 3170431 (+) |
| CI01000310_03190691_03191339 | NA | coding | downstream | 53669 | 3189997 ~ 3191430 (+) |
| CI01000310_03211078_03340983 | AKAP6 | coding | downstream | 74750 | 3211078 ~ 3341448 (+) |
| CI01000310_03481652_03682190 | NPAS3 | coding | downstream | 345324 | 3481652 ~ 3682190 (+) |
| CI01000310_03770003_03773402 | SRP54.S, SRP54, FAM177A1, SRP54A, SRP54B, SRP54C | coding | downstream | 633104 | 3769432 ~ 3773402 (+) |
| G440533 | NA | non-coding | upstream | 929 | 3095991 ~ 3098488 (+) |
| G440623 | NA | non-coding | upstream | 49629 | 3049510 ~ 3049788 (+) |
| G440483 | NA | non-coding | upstream | 243829 | 2854996 ~ 2855588 (+) |
| G440477 | NA | non-coding | upstream | 251869 | 2845923 ~ 2847548 (+) |
| G440472 | NA | non-coding | upstream | 272281 | 2826749 ~ 2827136 (+) |
| G440546 | NA | non-coding | downstream | 9906 | 3146234 ~ 3177391 (+) |
| G440659 | NA | non-coding | downstream | 56359 | 3192687 ~ 3192887 (+) |
| G440672 | NA | non-coding | downstream | 220496 | 3356824 ~ 3357153 (+) |
| G440566 | NA | non-coding | downstream | 229405 | 3365733 ~ 3369343 (+) |
| G440550 | NA | non-coding | downstream | 233657 | 3369985 ~ 3375732 (+) |
| G439845 | NA | other | upstream | 1187000 | 1911601 ~ 1912417 (+) |
| CI01000310_01508712_01511125 | FAM167A | other | upstream | 1586076 | 1508341 ~ 1513341 (+) |
| CI01000310_01207513_01226750 | CDC5L | other | upstream | 1860012 | 1207057 ~ 1227194 (+) |
| G439115 | NA | other | upstream | 2408225 | 651976 ~ 653356 (+) |
| CI01000310_00648731_00650082 | NAPB | other | upstream | 2449864 | 648566 ~ 650159 (+) |
