CI01000319_03500024_03502600


Basic Information

Item Value
gene id CI01000319_03500024_03502600
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000319
NCBI id null
chromosome length 6428943
location 3499272 ~ 3502830 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000319_03500024_03502600.mRNA
ATTTAAAAGTGTGTTTTTCCAGCAATGTCATCCTCCAGTGTTCGACTGACTGAGGAGCTTCAGTGCTCTATATGTCTGGACGTGTTCACTGATCCAGTCAGCACTCCATGTGGACACAACTTCTGCAAGACCTGTCTGAATAAGTGCTGGGACAACAGCCAGACCTGCAACTGTCCATATTGTAAAGAAACATTCAAGCGAAGACCTGATCTCAAGATTAATACCACACTCCGAGAAGTTGTAGATCACTATAAAAAGAAACGTCCTGAGAAAAAACATGTGAAAAAAAATCACACAGAACTTGAAGTTCTGTGTGACATCTGTGAGGAAAGAAAGCTGAAAGCTATAAAATCGTGTCTAGTGTGTCAGAGCTCTTACTGTGAAACTCACCTGGAGCGTCATTTGAGAGTGGCAGGTTTAAAGAAACACAAACTCATGGAACCTGTGAATAATCTGGAGGATTATATATGTCAGAAACATGAGAGACCTCTGGAGCTGTTCTGTAGAGATGAACAGACATGTGTTTGTCCGATCTGTGCCGTAACAGACCACAAGAACCACAACACTGTTCCTATAGAAGAGGAGAGTGAAGAGAAGAAGGTAGTAGAAGTCACTAACAAACTGATTTTAAAACGCTCATCATTTTCAGCCAAGCTGTCACAATGAAGTTTGATTTTATTAAATAAATAATTATAAAAACATATATTGTGTTGTTCTGTGTCTATAGACTCAACTGATAAAGACACAGAAAGATGTGCAGCAGACGATCAAGGAAAGAATCAAGAAGATTCAAGACATCAAACATTCAGCAGAAGTCAGAAAACTCTAGAAACACCAGGAACTGGTCTGAGATCAGTGTGAAGACTGATGAGAGTCTGGAGACTCTGAGGAGAGCTCTGACTCAAATTAAGGACACTTTACAGGAGAAACTCACACAAACTGATCTGAAGAGGTTGCAGCAGTATGCAGTGGATGTGACTCTGGATCCTGATACAGCTCATTCTAATCTCATTCTGTCTGATGATGGAAAACAAGTGAGAGATGGAGACATAGAGCAGAAACGTCCAGACAACCCAAAGAGATTTGATCACTGTGTATGTGTCCTGGGAAAAGAGGGATTCTCCTTGGGAAGATTTTATTTTGAGGTGCAGGTGAAGGGAAAGACTAAATGGGATTTAGGAGTGGCCAGTGAATTCATTAACAGGAAGGGAGAGATCACGTTGAGTCCCAGTAATGGATGTTGGACTGTGTGGCTGAGGAATGGGAATCAGTATAAAGCCTTTGCTGATTCTCCTGTCTCTCTGTGTCTGAGAGTGAAACCGCAGCGGGTCGGTGTGTTTGTGGATTATTCGGAGGGTCTGGTCTCCTTTTATGATGTGGAGTCCAGCTCTCATATCTACTCTTACACTGGTCAGTCTTTCACTGGCAATCTCTATCCATTTTTATGCCCATGCTTTAATGATGGAGGTAAAAACTCAAGTCCACTGATCATCACACCTGTTAATTACAATAAATCAGTCCCTCCAGGATTTCGCGGGACTTTATTCTGATTTTTGTGGCCTAAAATGACTAAATTTTAGGCAGCTTTTCTCAAAATTTGTGGCAATATTTACGACATTTCTTGTGTAGTTTTTCAGTGAAAATACACCACAGTCAACATTCTTCAAACATTTTTATTACTTTTCAGATCTCAAGAACCATTGGGCTGTGTAGTTCTTAAAAGGAGAACACTATAATTTAAAAATGTAATTTCAACATTTAATTTCAAAAGTAACACCAA

Function

NR:

description
Zgc:136713 protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000319_03500024_03502600.mRNA False 1780 mRNA 0.40 4 3499272 3502830

Neighbor

gene id symbol gene type direction distance location
CI01000319_03483504_03487172 NA coding upstream 10618 3480983 ~ 3488654 (+)
CI01000319_03402932_03447997 BTR26, BTR25, BTR24, BTY, BTR22, BTR18 coding upstream 50997 3402112 ~ 3448275 (+)
CI01000319_03394244_03396334 BTR26, BTR18, BTY, BTR25, BTR22 coding upstream 102782 3394244 ~ 3396614 (+)
CI01000319_03389749_03391750 NA coding upstream 107281 3389749 ~ 3391991 (+)
CI01000319_03307678_03308097 NA coding upstream 190809 3306484 ~ 3308463 (+)
CI01000319_03529404_03549529 NA coding downstream 25250 3528080 ~ 3549725 (+)
CI01000319_03582485_03652347 TRAPPC9 coding downstream 79655 3582485 ~ 3652447 (+)
CI01000319_03786208_03790365 NA coding downstream 283378 3786208 ~ 3791000 (+)
CI01000319_03839724_03847827 KCNK9 coding downstream 336852 3839682 ~ 3848923 (+)
CI01000319_03873107_03926475 COL22A1 coding downstream 368756 3871586 ~ 3927089 (+)
G452051 NA non-coding upstream 34917 3463496 ~ 3464355 (+)
G451741 NA non-coding upstream 122566 3376429 ~ 3376706 (+)
G451666 NA non-coding upstream 123505 3350739 ~ 3375767 (+)
G452053 NA non-coding downstream 2914 3505744 ~ 3506186 (+)
G452045 NA non-coding downstream 33720 3536550 ~ 3539369 (+)
G452107 NA non-coding downstream 174522 3677352 ~ 3678658 (+)
G452113 NA non-coding downstream 185312 3688142 ~ 3688369 (+)
G451662 NA other upstream 164448 3333281 ~ 3334824 (+)
G451677 NA other upstream 269941 3216340 ~ 3229331 (+)
G451500 NA other upstream 660323 2838086 ~ 2838949 (+)
G451485 NA other upstream 754749 2742741 ~ 2744523 (+)
CI01000319_04515268_04534770 NA other downstream 1028789 4515268 ~ 4536025 (+)
CI01000319_04787066_04788609 EIF1B, EIF1, GM6900 other downstream 1284210 4787040 ~ 4790529 (+)
G452541 NA other downstream 1836692 5336085 ~ 5353023 (+)
G452545 NA other downstream 1850864 5353694 ~ 5356035 (+)
G452543 NA other downstream 1856870 5359700 ~ 5371484 (+)

Expression


Co-expression Network