CI01000319_04002430_04030246 (FAM135B)


Basic Information

Item Value
gene id CI01000319_04002430_04030246
gene name FAM135B
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000319
NCBI id null
chromosome length 6428943
location 4002430 ~ 4030363 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000319_04002430_04030246.mRNA
ACAAGATCTCGGTCTCTCTCCGGGTGGATGTGGAGCCAGTGGCCGGCGTTTGATGGTTATGGCCTTGATGGTGGCTGTTTTAGTGTCAGGCGAGTGCAGTTTCAGCAGCGCAGGGGTTCATGATGGTGGAGTGTTCAGTCGGATCTTTCAGATCCTATACAGGAATGAGGAGGTGACCCTGGAGGATCGCATGAACTTTAGAGTGCACCTGCTGCTGGACGGGGAGAGGGTGGAGGAAGCTGTAAGTGAGGTGGACGTCCAGCTCAAACTAGATCTGCACTTCACTGACAATGAACAGCAGATCTGCAGTGAGAGAGAGTGTGATAGAGCCTCAGGCTGGCACAGTGTGTGTGTGTGTGTGCGTTTTAATCAAGAACATTTTGCGCGCAGTGGTAGGGGGGCTTGGCTAGGTAAAGGATCTCCAGAGAGTGAGGCTCCGCCCTCTGCGATGTCAGTGGAGAATCTGATGTTCGGGGCGGGATACTGCAAACCTGTTCCAACAGAGGGCAGTTTTTATGTGCCATCAGAGAACTGTCTGCAGAGAGCTTACACGTGGCACCGGCGCATCTGTAAACTGTTGCTGGCGGCTCACAGAGCTCTGCGCTCGTATTACACAGCACTAATGAAGGAGATCCCTCAACTGCAACGCATGGAGATGGAGGATCTTTCCCTTGAAGAAACATTAAACCAGCTGACTATTGAACTGCAGCTGCAAAGTGGCCATGAGAAGGTAGCCGAACAGATCAGTAAAGATCTGACGCAGCTCTGTGCTCAGCTGTCTGCTCTTTGGACACAGTTTTTGGAAGCCACGGTTCCTAATCCACATATCCGCTCATACCTGGCCCAGGAGCACCACACGCTAAGGGACAGCTCAGCTTTTAATTACAGAACTGAGAGTTATTATAATGATGAAAAAGATGAAGAGATGAATCCAATTTTGTCTTTATTACTAAAGCGGTTTTATTACACTGTCATACACAAGGTGGCCACAGAGATGCGCAACTCTGATTACCTGCTCCGAATGCCTCCACTTCCTGTGGAATGCCTGGACATTGACGGAGACTGGAGCAGCCTGCCAATCATCTTCGAGGACAGATACGTGGACACGCCCTGTTTAGACTACAACGTCCATGAGCAAAATCAGACTGTCTTGAACTCTCAGCCATGTCCTGAGCTAACCAGAACTATCAGTCCAGTTGAAGGAACACAGGACACAAATTCACCAGCATCACCCCCTGAGAAACCTCCCTGTGAAGAATGCATGGATTTACCCACCTACATGGCGCTGATTGGCCAGCAGGAGGATTGCATCACTGACTGTAAAGAGACCAGACCTCAAGCAGAGACTCTGATTGGCCATGTGTGTGAGACAGATATTGATAGAAGCGAATGCATCATGACAAGTGCCGATTCAAGAATTGAGTCTGTTGATGAAGCCACATGCCAGTATGAAACCGAGGAAGGATTTGATATTGACTGTAGGTCTGTAGACAGTGATGACGCAATAGATACGGGTAACCTGGAGAAAACTGGCAGCCAAAAAGAAACCGTTGACTTTGATGAATCTGATCATGCAGGTCTAAAACAAACTAATATTACCCAAAGTACTGATTTTAGTAGCAGACAGACATTGCAGCTTGTTCCAGCAGATGCTGCAGAACTTCCCGACCTCACCAGTCTTGACAGCTTCGAGTTCTTGCCCACTCATAACCATGACAACCATCTTCAAACACCAGGCAATACTGGGAGTCTTGGCAACGAGGAGCCACAGGCAGTATTAGATGACAGATACATTGAAGCACCTGCAAAGGATTATGGGAGCAAGGATACATCACCAGCTAATCTACTGAACACCAAGTCTCTTGGAACCGACCCTTTAGCCACGTCCCCTTCTCGTAACTTTCTACAACAGAACCGTCGCTTGTCCGAAAACCCGCCTAGGGGCATATTCTTGGGCGGGTCTAAGCTAATGAACCGCTCCTCCTCTGTGATCTCAGACTCCGGTATTGAGAGCGAGCCAAGCTCTGTGGCTTGGACCCTGGAGGGTCGAGGAGTTGTCGCAGGGGGTCGTGACGTCTTGCAGAACTTGGCGCGGCATCAGGCGGTGCATCAGAGCTCTCTGGAGGGCTTACAGACGGAAAGTCACGGCAGCCTGCCCAGTGCCACACAGGCCTCTTTGACCTCCATAAGCTCGCTACCGTACGAAGAGGAGGATGAGAGGCAGCTCAACACTTTGACCAAATCCGCCTCAGCGCCGCAGATCAGCAGCCCTGACGACACCGAGGAGGATCATGAAACACCCAATCAGGTGGTCTGTGTGGCCAATCAGCTGAGGCTGAGTGAGGAAGCAGCCAGTGAGGTGAAGCGTAATCTTATTGTGGAGGACAAAGAGGAAACAACCAATCAAGAGAAGAGGGATGTTTGTATGGCCAATCAGTTGAGGCTGAGTGAGGAAGAAGCCAAAGAGGTGAAGCGGAATCTTCAAGGCATTACTAGGGAGGATAGAGAGGAATCAATCAATCAGGAGAAGAGGAATATTTGTGTGGCCAATCAGCTAAGGCAGAGTACTGAAGTAGCTAATGAGGTGAAGCAGAATCTTCAAGGTGTTACTAGTGAGGATGGAAACGAAACAACTAATCAGGAGATTGACACAGATGAGTCGTCCAATCAGGAAAAGGCAGATCTTGCTTTTGTAAATACAGAAATGTTACTATACCAGCAATTTTTGTTGGATAATGGTGTTGAAAATGCCACAGTGGAGGAACTGACTGAAAACTCTGAGGAATGTCAAGGAAACATTTTGCTTAAAGATTATTCTGGTGTAATGGATGACAACACAGAGATTTGTAGCTGTGAAAATGAATATTGCAAACACAAAGGGGTGCTAGAGTTAAATGCATATCAAAAGGACCATGATGACATCAGTGTCTGTAACATACATTTGAATGAACTCGAGGAAGTAAGTATGGAGAACCTCCCAGATTTACCAACCACTGACAAGAGCAGTCACGGAATTACGGCTAATGAGAAAGAAAGGCCCGCAGATCTCATCAAGCTTCTGGCCAATGACAGAGACCAGCAGGCACTAGAGGGGCAGAGCAGAGCCAATAAAGTGCAAAGTACAGGTCTGGCATTCATGAATAAAAAGGTGGTGGAGGTTGTGAACCTGTCTGTGTCATGCGCTCCCACATGTCTGCCCTTCTCGTCTGTGCTTCGTGATTCACCGTCGGTCAGTGGAATCTCCACACGCCAAGCCACCTCCCCCATTACCCATCAACCCCTGGGCTCCTTCGGAATCATCTCCTCCAACACCTTTCTCGGTGCCGACCAGGAAATTAACGAGAGAATGATTAACTTCTATAAGGCAAAGGAAGCCCTGCTGAGTGAGCTGGTGTTCAGAGGCACTCTCTACAGTGATCTGCCTTACCTCGCCTCCGATCATCCATACTTCCCCCCTGAGGAAGACGACACAGAGTTTGAGGATGGGATACACCTCGTGGTGTGTGTTCATGGACTTGATGGTAACAGCGCAGATCTGCGGTTGGTCAAGACATTTATAGAGCTCGGGCTGCCAGGATCTAGACTGGACTTCCTCATGTCAGAACGCAACCAGGTGGACACATTTGCGGATTTTGACACCATGACTGACAGACTTATGGATGAGATAATTCAGCACATCCAGCTGTATAACCTCACCATCCACCGAATCAGTTTTATCGGACACTCTTTGGGGAACGTCATCATTCGCTCTGTTCTGACCCGACCCAGATTTCGCTGTTACCTCTGTAAACTCCACACTTTCCTGTCCCTGTCTGGACCCCACCTGGGAACACTGTATAACAACAGCACGCTGGTCAGCACAGGTCTATGGCTAATGCAGAAACTGAAGAAGTCTGGATCCCTACTGCAGCTTACGTTCAGGGACCACACTGACCCACGACAGACCTTCCTCTACACGCTCAGCAAGAAACCAGGTCTGCAGTTCTTCAAAAATGTGGTGTTGGTGGCCTCCCCACAGGACCGATACGTGCCCTTCCACTCAGCCCGCATTGAGATGTGTCGGACAGCCCTTAAAGACAGAACCACAGGTCCAGTATATACAGAGATGATCAATAACTTACTCCAGCCATTGCTGAGCGCTCCAAACTGTCGTTTGATCAGACAGAACGTGTTCCATGCGTTACCGAACACGGCCAACACGCTGATCGGACGCGCGGCTCACATCGCGGTGCTTGACTCTGAACTCTTCCTGGAGAAGTTTCTTCTGGTGGCCGGGCTCAACTACTTCAAATAGCCGAGCTTTAGAGATGACATCATGCCTTGAGTTCTGTTGGAAAGCCAATCAGATTACATTTCACATCAGCCAATCACATTTCATTTCAGAGTCATAATGAGCTCTGGAATTTTTTCA

Function

symbol description
fam135b Orthologous to human FAM135B (family with sequence similarity 135 member B).

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000319_04002430_04030246.mRNA True 4411 mRNA 0.49 18 4002430 4030363

Neighbor

gene id symbol gene type direction distance location
CI01000319_03873107_03926475 COL22A1 coding upstream 75341 3871586 ~ 3927089 (+)
CI01000319_03839724_03847827 KCNK9 coding upstream 153507 3839682 ~ 3848923 (+)
CI01000319_03786208_03790365 NA coding upstream 211430 3786208 ~ 3791000 (+)
CI01000319_03582485_03652347 TRAPPC9 coding upstream 349983 3582485 ~ 3652447 (+)
CI01000319_03529404_03549529 NA coding upstream 452705 3528080 ~ 3549725 (+)
CI01000319_04424107_04437627 NA coding downstream 393459 4423822 ~ 4437847 (+)
CI01000319_04478393_04509691 CDK12, CDK13 coding downstream 448030 4478393 ~ 4510337 (+)
CI01000319_04515268_04534770 NA coding downstream 484905 4515268 ~ 4536025 (+)
CI01000319_04536287_04545417 STARD3 coding downstream 505924 4536287 ~ 4546868 (+)
CI01000319_04550077_04553516 MREG coding downstream 518606 4548969 ~ 4555108 (+)
G452113 NA non-coding upstream 314061 3688142 ~ 3688369 (+)
G452107 NA non-coding upstream 323772 3677352 ~ 3678658 (+)
G452045 NA non-coding upstream 463061 3536550 ~ 3539369 (+)
G452053 NA non-coding upstream 496244 3505744 ~ 3506186 (+)
G452209 NA non-coding downstream 238408 4268771 ~ 4269460 (+)
G452297 NA non-coding downstream 414204 4444567 ~ 4445315 (+)
G452298 NA non-coding downstream 415600 4445963 ~ 4446197 (+)
G452299 NA non-coding downstream 416128 4446491 ~ 4446725 (+)
G452300 NA non-coding downstream 417426 4447789 ~ 4448033 (+)
G452043 NA other upstream 457711 3500279 ~ 3500512 (+)
CI01000319_03402932_03447997 BTR26, BTR25, BTR24, BTY, BTR22, BTR18 other upstream 581830 3402112 ~ 3448275 (+)
G451662 NA other upstream 667606 3333281 ~ 3334824 (+)
G451677 NA other upstream 773099 3216340 ~ 3229331 (+)
G451500 NA other upstream 1163481 2838086 ~ 2838949 (+)
CI01000319_04787066_04788609 EIF1B, EIF1, GM6900 other downstream 756677 4787040 ~ 4790529 (+)
G452541 NA other downstream 1309159 5336085 ~ 5353023 (+)
G452545 NA other downstream 1323331 5353694 ~ 5356035 (+)
G452543 NA other downstream 1329337 5359700 ~ 5371484 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location