CI01000319_04424107_04437627


Basic Information

Item Value
gene id CI01000319_04424107_04437627
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000319
NCBI id null
chromosome length 6428943
location 4423822 ~ 4437847 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000319_04424107_04437627.mRNA
CTTTAAAAATAGGCCTATCTAATCTGATGAAGCTGCTCTGATCTGGCAGTCTGACTGGCCATCACTGCAACAGTAACTCATTTCTGAGAAGGATGTTTCCTCTAGATTTTCACAAAATTGAGTCATGTCATATGCCGTAATCAAAACCCATGAGAGGAGTTGGTGGATTAACCGGTGTTACCAGGGGGATGGATTCACTCACAAGCCCCACCCTTCCAGCAAAACCTAAATAAAACACAGTTTCAATTAGGTGTACTCCACACACTCCATGGGCAGAGTCATACCATGCGCAGTAGGCTACTACATCTAATAAACCAAGATTTGACAAAGCACCACGTTGAGGAGTCTGTGGAATACATTAACAAAAAAGTAGGTCTATTTCTGTTTGAAGTGACAAAACCTCAAACATCACTGATGACTGTGCGACTGAAACACCGCTACATCACCGCGCTCCTGGGCTCCTCGACCATCCTGTCATTCCTGTACTTTCAAAACTCAGCTATGGTTTTGATTGACAGTTCTCACGGTTTAGTCTCAGAGCGAGCTCCGTGCACATGCGGTAACTGTGTGACAGATAATAGCTGGTTCAGTGAACGTTACAAACCCTCCATTCCACTTCTGCTCAACAGCAACAACAGTGTTTTACATGCAAACGTCGCCAAGTGGTGGAAGGAGCTTCAAGATGTACCAAATGTCAGCAACTACACAGCTGTGGTGGACCAGCTGTTTTCTCTCTTCCCCGATGAAGAACACTACTCAGACGCTGGTCCAGATCGCTGCAGAACCTGTGCTGTGGTGGGAAACTCTGGGAACCTCCTGGGATCCCACTATGGGCCTCTTATAGATTTCCATGACTTTGTCATAAGGATAAATAAAGGCCCGACAAAAGATTATGAGAAGGATGTGGGGTCCAAGACCACTCACCGGATTATGTATCCTGAGAGTGCCATGGACTTGGACAACTCCACCCATCTGGTGCTTTTTCCCTATAAGATTCTGGATATGCAGTGGCTTTTCAGTGCTTTCACCACTAAGAACATCACAGAAACATACACAGAAGTTCCATCAACAATCAAAGCAAATAAGGACAAGGTGATGATCCTCCACCCTGAATTCATAAGATACGTGCATGATAACTGGACAGAGGGTCATGGCAGATATCCATCTACTGGATTCTTAACACTAATATTCGCTCTTCACATCTGTGATGAGGTAAAACTGTTTGTGGCGTGGCACCAGCGTGGCATTGCTGTTGCTTTTGAGGGAGTATCAGTTTATACAAGGGTCTAAAAGTATCAGATTAGATTACCAGGATTATAGCAAATATTTGACTGTGGATGTTCTCATGAAAAAGAGTCCAGTGCAGGCTATTCATACCAAAGCAATAAGCCATTCAGGGAAGTGTTAGCATTAAAACATGAAGCACTGAACCATAGTATAGTGGTTAGCATTGTATGTGCACCGATGGGTAATCTGTATCTGCCTGAAAGTAAAATGGTGATATCTTAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000319_04424107_04437627.mRNA True 1510 mRNA 0.44 6 4423822 4437847

Neighbor

gene id symbol gene type direction distance location
CI01000319_04002430_04030246 FAM135B coding upstream 393459 4002430 ~ 4030363 (+)
CI01000319_03873107_03926475 COL22A1 coding upstream 496733 3871586 ~ 3927089 (+)
CI01000319_03839724_03847827 KCNK9 coding upstream 574899 3839682 ~ 3848923 (+)
CI01000319_03786208_03790365 NA coding upstream 632822 3786208 ~ 3791000 (+)
CI01000319_03582485_03652347 TRAPPC9 coding upstream 771375 3582485 ~ 3652447 (+)
CI01000319_04478393_04509691 CDK12, CDK13 coding downstream 40546 4478393 ~ 4510337 (+)
CI01000319_04515268_04534770 NA coding downstream 77421 4515268 ~ 4536025 (+)
CI01000319_04536287_04545417 STARD3 coding downstream 98440 4536287 ~ 4546868 (+)
CI01000319_04550077_04553516 MREG coding downstream 111122 4548969 ~ 4555108 (+)
CI01000319_04581466_04584558 ENO2, ENOG coding downstream 143619 4581466 ~ 4584565 (+)
G452209 NA non-coding upstream 154362 4268771 ~ 4269460 (+)
G452113 NA non-coding upstream 735453 3688142 ~ 3688369 (+)
G452107 NA non-coding upstream 745164 3677352 ~ 3678658 (+)
CI01000319_03529404_03549529 NA non-coding upstream 874780 3528080 ~ 3549725 (+)
G452045 NA non-coding upstream 884453 3536550 ~ 3539369 (+)
G452297 NA non-coding downstream 6720 4444567 ~ 4445315 (+)
G452298 NA non-coding downstream 8116 4445963 ~ 4446197 (+)
G452299 NA non-coding downstream 8644 4446491 ~ 4446725 (+)
G452300 NA non-coding downstream 9942 4447789 ~ 4448033 (+)
G452267 NA non-coding downstream 11542 4449389 ~ 4452465 (+)
G452043 NA other upstream 879103 3500279 ~ 3500512 (+)
CI01000319_03402932_03447997 BTR26, BTR25, BTR24, BTY, BTR22, BTR18 other upstream 1003222 3402112 ~ 3448275 (+)
G451662 NA other upstream 1088998 3333281 ~ 3334824 (+)
G451677 NA other upstream 1194491 3216340 ~ 3229331 (+)
G451500 NA other upstream 1584873 2838086 ~ 2838949 (+)
CI01000319_04787066_04788609 EIF1B, EIF1, GM6900 other downstream 349193 4787040 ~ 4790529 (+)
G452541 NA other downstream 901675 5336085 ~ 5353023 (+)
G452545 NA other downstream 915847 5353694 ~ 5356035 (+)
G452543 NA other downstream 921853 5359700 ~ 5371484 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location