CI01000319_04697405_04706265


Basic Information

Item Value
gene id CI01000319_04697405_04706265
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000319
NCBI id null
chromosome length 6428943
location 4695163 ~ 4706544 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000319_04697405_04706265.mRNA
GTTTAAATAGAGTGAAATACATATATATTATCATGGTGAAATGTGTCCCCCACATGCTATCATAGAGTACATGTCTGCTTATCTGCTATGCTTATCATTGAACATATGTTATTCACAGTACAATAGTAACAAGCCCTGTTCTTTTACATGGTTTATCTTCAGTATTGCATGACGTACATCACAAAACATGCACAAGAATACCCTTATTTTATAAATTACTACTAAGTCTGTCCTTCATTTGTCAATTTTAAATGATTTTTAGAAATATTCTCAAATCAATCAATTGTTTTATTCATTTTAAAGTTGTTAACTGCTTCAAATGCTTCAGAAACTTTCCTAGAAATTGACAAAAAAAAAAAAAATTGGTTGAAATGTATTTTCAAACGTAGTCTTGGCTTTCAAACTGCATTATTTCTAATGTAATACAGCTGACAAGTCGTGTTCAAATATGAATATGTTTGTATTCATATGCATAACTGTTTTGTGCTGTCATTTGCACTACTAAACATGCTTTAAAAGTTTTCAAGAACACAAAATTGTGATGAACATCTGACTTTAATCCAACTTTAATATGTGAATTTAAGTTTAATGGTTGAATACTGCAACTTCACCTGCTAACCAAAAGAATAAAATAAAATAAAAATGTGAAAAATTAACTCTTTCAAAAGTAGAAGGCAAACTGTCTCAAATTACAACACAGTGAAGCAGCAGAATTAAAAAAGAATACTGAATTATAGAAAATTGTGTCCTCCATGGAGCTCAAAAGCTCACTCTAGATAATAGCATCTGAAAAAAAGAGACATATGAACAAGATGTACAAAAGGAATGAATCATTGAATAATTATGATCTTGAACTTTATAACAATCAGCTAAGATCTTACAGCAGCTGCACATTATCTACAGAAAATACCTCAAATTAATTTTGTGTCTCTCTTTGCCCCATATACCAGACATAGCCAGTTTAGTAACTGTGTTGGTATGAGTCCCGCAGTCTTCTTCCTCTGCTGCTATAGGAACAGGAACCGGGGCTGTGGTATATTTGTGGCCACAGATCGCATGCACGACAAGGGAGTTCTTTTCCTGCCATTTTACTTCAAAAACTCAGACATACATTTTGTCATTCTCATTTAAAAGGCTTTACACAGAAGGAAATGAACCGAACTTCTGCAAAATGAAGTACATTCACAGGAGATGAAGTCTGCAGTCATATTAGTAGTCTAATAAAAGTTTTTTTGCGTTTGTTTGTTGTTGTTATTTAACATGAAGTGGGTCGCCTCAAGAGGGCAGACATCTTTTGTTTGTGGAAGAAATGAATGAATGAGCGACCTTTTACAATGGCACCAGCAACTGAAAACTTAGCAGATTCAGTAATATGCTTTTGTCCACTAGTTTAAGTCCAACATCCTATTGCACCTTAAAAACATCCTAAGCTTTTTTATTATCTCAAATGTTTGTGGGCGTGGTCAATAAAATGAATAATAAATACAGATTTCTTTTCTCCAGTCATTTTACATGTTCCTTATGCAATAAACACTATAATTATCTTGGGAAAATATACGCTGGCGCTGGCAGCTCAATTTCAAGGCGCCACACAACATGCGTTTGAATCTGTAATCTACCATGATACTCGCCCCACCTTCCTTCTAAATCATGCAGCGGCTGTTTTACCGTATTCAAAGTAGAGGAGCGCACACAAAAACGTTTGTAAGAAGTGGGAGTCAATGCAGGAAAATCACAATAGCATTCGCGACAAAAGTAGTGGATATAATAGCCAGTAACTGAGTAGCTATAATATACTAAACGTTAAAGAGTGTTAAATGAATCATTTAATGAATCATTTATGCGCCCCCGTCCCTCAATCCAAAACTACAAAACGTCGGATGCACAAACCTGCTAACAAACGGCTCTATTAAACTACTTTTATTGAAAACGGCGTTTTGCCCTGGCTTGTTTCTGGGTTATGTGCGCAATACGTTTTAAATTTGGGGCAAAATGGCGTAGTGGTCGTCTGAGGGAAGATCCTCAAATGTGCTTATGGACTACTTTGAATCCCTGTGCGACTTCACGGTACAGTACGGCACAGCATACTAAGGGGTGTATACATTCACGATGTGTTTAGCGAGAAAGCGGTAACTGTTCGTTTCTAGGCAGTTGTTCTGGGGCACTTCTGTATATTTAACACTATTTTGGGGGGTATGAAGAAGAAGAATGACAGAGGTCTTCCAACAGAGCGGTTGTAAACATGAACGGTGCCCTGTACATTTCGTTTTTCCAAGGTCAGCTGGAGTCCGCACTGGAGCAGGTAGTGCAGCTCGCCGTTCAGGAAATCACCAAGACTGTTGGGGCCACTTTGAATTCAATGCTATTGGAAACAGCCACCAAAGAGCAGGAAAATCTGCGTTTAAGGGCAACCCTTCAGTCTCGGCAGCAAGAATACGGAGGGAACGGGAAAAGCAATGCGTCTAAAAGAAAAACAGACGCGAACGATGAAACAAAGCAACACACCCCCAGTCAGAGCCCTGACTGTGGCGTTCAGTCTGAAACGCTCAGACGTGAACAGAAAGGGCGAGCAGTTGGTCAGTTAAAATCTGTTATGGAACACGTGCTGGAATTCGCCGTTTGTGAGCTGACCAAAATTGTAGAAGACAGCTTTGACGACCTGCTCTTGGAGTTTACCAAGAAGGAGCGGGAAAACCAGATATTGAAAGAGCAGCTACAGGAAAAGAAGATAGTGGAAACCAATGACGTGGTTGCTGTGGTACCAGAAGACTGCGAAAATGACTCTGCCTCTCCTAGCAGTTCCAAAAAGTCTATTTTTAAGCTCTTATGTAAAAACAAAGCAAACCTGGCCAACAAACAAGACAAGCAGACTGTCATTGCAGTGTCTCAAGACTGGGTGCCCATCCTGGACAAAGTATTTGGGCAGAAGTGGTGCAATGACTTCTGGCAAATCAAAGAGGTCACCACCAGTAAGGAGGAGCGCAACGAGCTGAACTCTGCCTCGGTGACTGACATGGACAGCCTAATTCGAGAGACGCTCATGCCGTCTTGCCTGGCCAGTCAAAGGAAACTGGAGCTTGAGGTGGGGCAGCCGCCCTGGTTGCAGGTAGACGACATGGAGGTTGTTTCTTTATCCTCGGACACACAAGGCGTTCCAGTCATCAGCTCCACAGGCGACAACTCTCAAATCAGATCCCCGTCTATGTTGCAAAGACTCCTGACGCTTCCATCCCAGCTGCTCGAGGATGATGATGAGTCCATGGATGCTGTTCCCAGTCTGGAAGTGTTCATGGACCCAGCTGATTCGCAAGTCGGCAAAGATTCAAAGAGTAACCAGGCGAATAAGAAAAAGGAAGAGGAGGGTGAAGACGAGGTGGATGACGAAGATGACGACGAGATGATGAGCAGGTGTGAGTCCTCGAAATCCAAAGGTAGGAGGAAATCCCATGCTTGCAAAGAGTGCGGCAGAAAGTTCAGCCGAGCTCATCTACTCAGAGCTCACCGGCAAACGCACGAGGAGACGCCCAACCGATGCCCACAATGTGGAAAGAGTTTCTCCCAGTCTTCAAGGCTCCAGGCTCACTTACGGACACACACGGACAAAACAATATGAGAGCGTGTAGATGAAGCAAATTCAGGAGAAATTTAGCAAATGAAAAGGGATGTTTTTCTAATATTTATTGCTTTTCAGAGTGAGTCAGACTTTCAAATTCATTTAAAATAGGGATGCTCCGATCAGGATTTTTGCATTGGCTGATATCGATCCCGATCATTTAAGCTTTATAGAAGTGATATGTAGTTGACTGTCATTGTTAACTTTTTTTTTTCTGATAAAATAATACCACAGATGTTGCCTTGGTTATATTATTCACAGTAATGTTGTACAACCCCA

Function

GO:

id name namespace
GO:0046872 metal ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000319_04697405_04706265.mRNA True 3892 mRNA 0.41 5 4695163 4706544

Neighbor

gene id symbol gene type direction distance location
CI01000319_04626091_04632375 ZNF646 coding upstream 62594 4625760 ~ 4632569 (+)
CI01000319_04581466_04584558 ENO2, ENOG coding upstream 110598 4581466 ~ 4584565 (+)
CI01000319_04550077_04553516 MREG coding upstream 140055 4548969 ~ 4555108 (+)
CI01000319_04536287_04545417 STARD3 coding upstream 148295 4536287 ~ 4546868 (+)
CI01000319_04515268_04534770 NA coding upstream 160261 4515268 ~ 4536025 (+)
CI01000319_04714806_04715176 NA coding downstream 8262 4714806 ~ 4715569 (+)
CI01000319_04716980_04720666 NA coding downstream 9897 4716441 ~ 4720672 (+)
CI01000319_04741909_04748409 NA coding downstream 34436 4740980 ~ 4748943 (+)
CI01000319_04787066_04788609 EIF1B, EIF1, GM6900 coding downstream 80522 4787040 ~ 4790529 (+)
CI01000319_04869169_04900787 PLAK, JUPB coding downstream 162625 4869169 ~ 4900900 (+)
G452274 NA non-coding upstream 93622 4595669 ~ 4601541 (+)
G452256 NA non-coding upstream 112487 4575372 ~ 4582676 (+)
G452257 NA non-coding upstream 133475 4561039 ~ 4561688 (+)
G452309 NA non-coding upstream 146342 4548607 ~ 4548821 (+)
G452277 NA non-coding upstream 177130 4516692 ~ 4518033 (+)
G452351 NA non-coding downstream 71366 4777910 ~ 4778144 (+)
G452390 NA non-coding downstream 238409 4944953 ~ 4945452 (+)
G452427 NA non-coding downstream 352438 5058982 ~ 5059335 (+)
G452458 NA non-coding downstream 446182 5152726 ~ 5153054 (+)
G452455 NA non-coding downstream 450836 5157380 ~ 5159750 (+)
G452043 NA other upstream 1150444 3500279 ~ 3500512 (+)
CI01000319_03402932_03447997 BTR26, BTR25, BTR24, BTY, BTR22, BTR18 other upstream 1274563 3402112 ~ 3448275 (+)
G451662 NA other upstream 1360339 3333281 ~ 3334824 (+)
G451677 NA other upstream 1465832 3216340 ~ 3229331 (+)
G452541 NA other downstream 632978 5336085 ~ 5353023 (+)
G452545 NA other downstream 647150 5353694 ~ 5356035 (+)
G452543 NA other downstream 653156 5359700 ~ 5371484 (+)
G452735 NA other downstream 1001618 5712686 ~ 5712732 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location