CI01000319_04716980_04720666


Basic Information

Item Value
gene id CI01000319_04716980_04720666
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000319
NCBI id null
chromosome length 6428943
location 4716441 ~ 4720672 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000319_04716980_04720666.mRNA
GCATAAAACATTACATAGACCATAATGCCCAAAATCACAAACTTATTTGAACGCCAATGAAAATGAGTCTCAAGTCTGCTTTTAAATACATCAATAGAGCTGTGGATTTAATCTTTAATGGCAAATCATTCCACAAAGCACCAACACCAACTGTTGCTAGACACGAGTTGGTTTTCCTCCATCTTTGGTAATGCGTTTTCCTGTGGAATGCAGCACCAAAAAATAATCTGATGTTGACATGGGCTCAATTGCGCTTTTACAACATATGAAATTCTGGTTCCATTGTGCCTATACTAAGTCTATACTAATAAAGGGACTTTCAGGTGCTGTTTAAATGCTGTACATTGAATTTTGTTTGTTTGTTTGTTTCCTCCCCATCCAGGAGCCAGGGGAATCACGGTTGTTCCTAACCCCTGTCAGAGGTTGCCGTGGCAGCAGTGACAATCCCCGCTCAGGAATCCCGCTTTTATCTCTGTGAAAGTAAGGTATATTACTCATAACGGAAGCTTCGGTCAGGCGGTGGACTAGCTTCCACCAGGATGGCAGAGTTGGAGACAGAATGCATCACTTTAGGACTAAATAATTTGGTGTCGGAGTGCGACACTCCGCCACTTGACTCTTTGCGAGCGGAGTGCACCACTCCGACCCTGACCATGCTCTCGTCGGAATGTAGCACGCCCACGCTCAGCTCGCTGGCGTCCGAGATCGTGGAGCCCATGGCCATGCTGCCATGCATCAAAAGCGAGCCCGACCTCGACCCCATCCGCACGGTGGACCTCTCCGTGATTCAGCCCCTGAGCACGGCCGAGCTGGGCTCCGAGCAGATCAAGATGGAGATCAGCGGCCTGGACTACATCAAATCGGAGCACCACAGCGACCTCCATTCCTTCCACAGCACGGAGCTGGACTCCTACAAGTCACACTATGAACCCAGCCTGGTGTTCGACTACATCACCCACGTCTCGGACAGCCTGGAGTACATCAAGTCAGAGCAGCACTCAGACCTGCACAGCTACTACGCCAGCGAGCTCGGCGCCATCAAGACCGAGTACGAACCCAACCTCATGTCCAGCCACATCAAGACCGAGATGAACGGCCTGGAGTCCATCCACATGGCGGAGCTGCGCACCGAGCTCAACAAGCTCCGGCCCGATACCGTCATCGACGGCATGGGGAAAATGGACTCAGATTTCCCCTCTGGAAACCTTTACGAACTGACATATTATGGATGTTTATCACCTAATTGGTGTCCCAAAAGCCTCATCTTTCACAAGGGAGCCGGTCTAAAGTAGGCTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000319_04716980_04720666.mRNA True 1298 mRNA 0.50 2 4716441 4720672

Neighbor

gene id symbol gene type direction distance location
CI01000319_04714806_04715176 NA coding upstream 872 4714806 ~ 4715569 (+)
CI01000319_04697405_04706265 NA coding upstream 9897 4695163 ~ 4706544 (+)
CI01000319_04626091_04632375 ZNF646 coding upstream 83872 4625760 ~ 4632569 (+)
CI01000319_04581466_04584558 ENO2, ENOG coding upstream 131876 4581466 ~ 4584565 (+)
CI01000319_04550077_04553516 MREG coding upstream 161333 4548969 ~ 4555108 (+)
CI01000319_04741909_04748409 NA coding downstream 20308 4740980 ~ 4748943 (+)
CI01000319_04787066_04788609 EIF1B, EIF1, GM6900 coding downstream 66394 4787040 ~ 4790529 (+)
CI01000319_04869169_04900787 PLAK, JUPB coding downstream 148497 4869169 ~ 4900900 (+)
CI01000319_04907275_04915465 WIPF2B coding downstream 186334 4907006 ~ 4915596 (+)
CI01000319_04931863_04933044 NA coding downstream 210981 4931653 ~ 4933086 (+)
G452274 NA non-coding upstream 114900 4595669 ~ 4601541 (+)
G452256 NA non-coding upstream 133765 4575372 ~ 4582676 (+)
G452257 NA non-coding upstream 154753 4561039 ~ 4561688 (+)
G452309 NA non-coding upstream 167620 4548607 ~ 4548821 (+)
G452277 NA non-coding upstream 198408 4516692 ~ 4518033 (+)
G452351 NA non-coding downstream 57238 4777910 ~ 4778144 (+)
G452390 NA non-coding downstream 224281 4944953 ~ 4945452 (+)
G452427 NA non-coding downstream 338310 5058982 ~ 5059335 (+)
G452458 NA non-coding downstream 432054 5152726 ~ 5153054 (+)
G452455 NA non-coding downstream 436708 5157380 ~ 5159750 (+)
CI01000319_04515268_04534770 NA other upstream 180416 4515268 ~ 4536025 (+)
G452043 NA other upstream 1171722 3500279 ~ 3500512 (+)
CI01000319_03402932_03447997 BTR26, BTR25, BTR24, BTY, BTR22, BTR18 other upstream 1295841 3402112 ~ 3448275 (+)
G451662 NA other upstream 1381617 3333281 ~ 3334824 (+)
G451677 NA other upstream 1487110 3216340 ~ 3229331 (+)
G452541 NA other downstream 618850 5336085 ~ 5353023 (+)
G452545 NA other downstream 633022 5353694 ~ 5356035 (+)
G452543 NA other downstream 639028 5359700 ~ 5371484 (+)
G452735 NA other downstream 987490 5712686 ~ 5712732 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location