CI01000319_04741909_04748409


Basic Information

Item Value
gene id CI01000319_04741909_04748409
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000319
NCBI id null
chromosome length 6428943
location 4740980 ~ 4748943 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000319_04741909_04748409.mRNA
CTATAAAGGGGCACTAAGAGGTAAAAGTGGACTGTTTGAAACTACTCATGTTTGTGCATGTACTTGTGTGCACTAGACAGAGCAGCAGGATGTTTCCCGCAGGTTTAGCTTAACATATCAAATTCCTCCCTTAGGCTGTTGAGCTGAGGACAGACCTCTGCGTAAAAAGAGATTCATGATACATTTTATTATTTATTTTTTGTTTGCCTTTAGTTCTCATATTGTTATATCGAGAGTTTGACATGAGCTTTGTACAAATATTACTTTACAATAAGATTGGGCTAATAATTATATTTAATAGTTATAATGTGTTTAATATAAATGTGTATGTGTACCCTGTGATTGACTGACAATCTGTCCAGAGTGTTTCACCCACCTACGGCCCTCTATAGCATCCCCTCGACCCTACAGAGGACAAGCAGAGAATGAATGGACAGGTGGATATTTAATATAATAAAAAGAACGAACATTTGATTGATGAGTCTTATGTTTTAAAACTCAAAATCAGATTACAAAGATAAATTAATTTCCTATTCTCATTTACCAAATTTTCTGTTCATTAATCGACACGGAAAGTGTGTTCCCCAGTTTCAAAAGTTAAAGAGTTTAGTATGCTTGAGCTGCAGGAATTTACTGTGGTATTTGACCTCTCCCTATTTTGCATATATTCAGAGAAAAAAAAAATCTCTGCTGCCAACAATGTTCACTCTCAAAATGCTATACTACCCCATAATAAAGTTTACATTTTTAATGTTATTCAAAGTTTTAAATAATGGTAGTCTTTTCATAAGTCACCAATTGATTGAAGATTAAAATGAATAATTGTTCATCAGTTATTGTCATTAATGCACCATAAAGCAACGTGTTTCTGAATAATACTGATACCATCTTTCTTAAAAAGAGGGGGAAATGAGGTTCTTTACATTTACATGACCCTCAGTCGTACAAAAACTTGTGATCTAACGGTGTTAAAAGAAAAAGTATGTTTGTCGACACAGCGTCGATTGCGTGCTCGACCACAAGAGCGCGCGCGTGTGACAAGAATGGCGCGGTTTTCTGAGGGAGAGGAACTGGCGGATCTTCAGCTCAAGATCAGCATTAGCCTTCTCGAGGGAGCGCACCTTCTCCAGATAGGAGGCCAGACGGTCATTGAGGTTTTGCATGGTGGCTTTCTCATTTGCAGACACATCAATGGCATCAGTCAGGTTGAAACCAGCACCACCTCCAAAGCCAGCACCTCCAGCAGAGAAGGAACGAGAAGCAGAGGCACTGGAGATACGGACACCGGTTCCTCCTGCAAGCCAGCACCTCCAGCAGAGAAGGAACGAGAAGCAGAGGCACTGGAGATACGGACACCGGTTCCTCCTGCTCCCCCATACACGCTACCGGCACGCATGGGTGGAAGAAGAAGACATCATTTTGAAGGAGTCTTGCTGTTGTTCTCTACTCTGGCTGGAGAATGAGTGAGCGGATGAGTGAGGAGAAGACGACCCTTGTTCCTTTTATGTGGACAAATGGGGGAGGGATTAGATGGATGAATTGCCCAAGGTGGGGGAGCATGAAACTATTTGCCCATTCCCCGAGGTAGCAGGCGTGGCTGAAGACAGGTTTGCATGTTGTGTTAACTTTTAACAGTTTCACTTAAATTCCTCAAAAACTCCTTACATTTTGACTCAAGCGTAAAATCATGGAATGACTGAAAGGTGTGTGGGTTTTTTTTCTTTTTCTTTTTTTTTCTTTAAATTAATTAATTTTATTCTCTTCAATGAAACTTTTGATGTTTGCATTAGGAATGCACAGTATATTGTCTCTATCAGTCTTATATTTTCAAGAAATTATATGTATATTATATATATCACAAAGCATATATTCAAATCAAAAATACCATATTTTTTCCATATAATTTAGTTTGCGTATGTTTTATATTATTTTTTATTTTTTTTCAGATGATACAATTGTTGTTTGATGTCCTTACTGTTGCATCAAAATGAACTAGA

Function

NR:

description
keratin

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000319_04741909_04748409.mRNA True 1997 mRNA 0.38 3 4740980 4748943

Neighbor

gene id symbol gene type direction distance location
CI01000319_04716980_04720666 NA coding upstream 20308 4716441 ~ 4720672 (+)
CI01000319_04714806_04715176 NA coding upstream 25411 4714806 ~ 4715569 (+)
CI01000319_04697405_04706265 NA coding upstream 34436 4695163 ~ 4706544 (+)
CI01000319_04626091_04632375 ZNF646 coding upstream 108411 4625760 ~ 4632569 (+)
CI01000319_04581466_04584558 ENO2, ENOG coding upstream 156415 4581466 ~ 4584565 (+)
CI01000319_04787066_04788609 EIF1B, EIF1, GM6900 coding downstream 38123 4787040 ~ 4790529 (+)
CI01000319_04869169_04900787 PLAK, JUPB coding downstream 120226 4869169 ~ 4900900 (+)
CI01000319_04907275_04915465 WIPF2B coding downstream 158063 4907006 ~ 4915596 (+)
CI01000319_04931863_04933044 NA coding downstream 182710 4931653 ~ 4933086 (+)
CI01000319_04949418_04952350 PDK2B coding downstream 200362 4949305 ~ 4952350 (+)
G452274 NA non-coding upstream 139439 4595669 ~ 4601541 (+)
G452256 NA non-coding upstream 158304 4575372 ~ 4582676 (+)
G452257 NA non-coding upstream 179292 4561039 ~ 4561688 (+)
G452309 NA non-coding upstream 192159 4548607 ~ 4548821 (+)
G452277 NA non-coding upstream 222947 4516692 ~ 4518033 (+)
G452351 NA non-coding downstream 28967 4777910 ~ 4778144 (+)
G452390 NA non-coding downstream 196010 4944953 ~ 4945452 (+)
G452427 NA non-coding downstream 310039 5058982 ~ 5059335 (+)
G452458 NA non-coding downstream 403783 5152726 ~ 5153054 (+)
G452455 NA non-coding downstream 408437 5157380 ~ 5159750 (+)
CI01000319_04515268_04534770 NA other upstream 204955 4515268 ~ 4536025 (+)
G452043 NA other upstream 1196261 3500279 ~ 3500512 (+)
CI01000319_03402932_03447997 BTR26, BTR25, BTR24, BTY, BTR22, BTR18 other upstream 1320380 3402112 ~ 3448275 (+)
G451662 NA other upstream 1406156 3333281 ~ 3334824 (+)
G451677 NA other upstream 1511649 3216340 ~ 3229331 (+)
G452541 NA other downstream 590579 5336085 ~ 5353023 (+)
G452545 NA other downstream 604751 5353694 ~ 5356035 (+)
G452543 NA other downstream 610757 5359700 ~ 5371484 (+)
G452735 NA other downstream 959219 5712686 ~ 5712732 (+)

Expression


Co-expression Network