CI01000319_04931863_04933044


Basic Information

Item Value
gene id CI01000319_04931863_04933044
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000319
NCBI id null
chromosome length 6428943
location 4931653 ~ 4933086 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000319_04931863_04933044.mRNA
GTATAAATAGCCCATAATTTAATAAAACACAATGCATATGAAGATCTTACTCTTATTTTGTCTATAAATAAACATTGTACTTACAGACAGACTGGAACATTTTCCCATACAAATCTAGACAACTATATATTTTAAAGCCAATGTTATAATATTTTAAGCCAATTATTGATGCATTCTCTATCTTCTCCCCTGCATTAGTGAAGGATAAAAATGTCCCAAACTGATTCCAAAACTGCTCGGAGGATGATAATTGCCTTATTTTTGTTGGCATGTTTTCTACTCTCTTTATACTATCTCCTACCAGTGGGGTATTTTAACATAAACTTGTTTAACCACCCTGCTGAGCAAGTCCAGAGAAATAACATCACCGAAGAAACTTGCCTCCCTGTTCTTAAGACGCAGAACTACAGGTGCACTGTGAACAACAACGTGGACAAACTCCTGATGACAATATCTGCACCAAAACCCTTGACTATCACTGAGAAAGAACCACCAGACACCATTATGTTGATCTGGATGTGGCCTTTTGGTGCTAGATTTGACCTTGGATCCTGCAGTTCAGCTTTCAATATCCATGGCTGTCATTTAACAGATGACAGAGGTCTGTTTGACCAAGCACATGGGGTTATGATTCATCATAAAGATATCAGTTGGGATTTATCCAACATGCCGAAACTTCCACGACCTACTTGCCAGAAGTGGATATGGTGGAATATGGAGTCTCCAAGTAATTCAGGTCAAAATCCCCTGCTAAAGGACCTGTTTAATCTGACTTCAAGTTACCGCCGAGATTCAGATATTCCAGTACCTTATGGATGGCTCTCAGAGGCTACAAAGGAAGAGAAAAACTATACTATCCCAAAGAAGAGCAAATTAGTTTGTTGGATAGTAAGTAACCATAATCCAAACTATAAGCGTTCACATTACTTTACTGAGTTTGTGAAATACATTAATGTGGAAACCCATGGAGGGCACTTCAACAAGCGAATTAGTAATGATGAATATGTAAATTTGGTGTCCAGTTGCAAATTCTACCTGTCCTTTGAGAATTCCATTCATAGAGACTACATGACTGAGAAGCTGTTCAACCCTCTAAATATTGGTACCGTTCCTGTTGTTATTGGCCCACCGAGAGAGAACTATGAGCAGTTTATTCCAAGTGAAGCCTTCATCCATGTGGATGACTTCCCATCCCCAAAAGAACTGGCTGATCATCTGAGACTCATGGACCAAAATGAGGATCTGTATATGCAATACTTCACCTGGAGAGAACATTTTGTTTCAAAGATTACCTCATTCGGATTTGAACATGTCTGTCGGACTTGTGATTATATTAGAAAGAATAAGCACTACAAAGTGGTCAGAGATCTCAACAGCTGGTACTGGGGTTAGGGAGGGAGGGGGGGGGGGGCTGACTGCCCAAGTCATGAGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000319_04931863_04933044.mRNA True 1434 mRNA 0.40 1 4931653 4933086

Neighbor

gene id symbol gene type direction distance location
CI01000319_04907275_04915465 WIPF2B coding upstream 16057 4907006 ~ 4915596 (+)
CI01000319_04869169_04900787 PLAK, JUPB coding upstream 30753 4869169 ~ 4900900 (+)
CI01000319_04787066_04788609 EIF1B, EIF1, GM6900 coding upstream 142948 4787040 ~ 4790529 (+)
CI01000319_04741909_04748409 NA coding upstream 182710 4740980 ~ 4748943 (+)
CI01000319_04716980_04720666 NA coding upstream 210981 4716441 ~ 4720672 (+)
CI01000319_04949418_04952350 PDK2B coding downstream 16219 4949305 ~ 4952350 (+)
CI01000319_05112104_05116909 NA coding downstream 178547 5111633 ~ 5117074 (+)
CI01000319_05435510_05450379 NA coding downstream 502143 5435229 ~ 5450632 (+)
CI01000319_05618356_05625888 FLOT1, FLOT1A coding downstream 685270 5618356 ~ 5626767 (+)
CI01000319_05651284_05669061 KIFC1, ZBTB22B coding downstream 718028 5651114 ~ 5671460 (+)
G452351 NA non-coding upstream 153509 4777910 ~ 4778144 (+)
G452261 NA non-coding upstream 170329 4665120 ~ 4761324 (+)
G452274 NA non-coding upstream 330112 4595669 ~ 4601541 (+)
G452256 NA non-coding upstream 348977 4575372 ~ 4582676 (+)
G452257 NA non-coding upstream 369965 4561039 ~ 4561688 (+)
G452390 NA non-coding downstream 11867 4944953 ~ 4945452 (+)
G452427 NA non-coding downstream 125896 5058982 ~ 5059335 (+)
G452458 NA non-coding downstream 219640 5152726 ~ 5153054 (+)
G452455 NA non-coding downstream 224294 5157380 ~ 5159750 (+)
G452504 NA non-coding downstream 231093 5164179 ~ 5168282 (+)
CI01000319_04515268_04534770 NA other upstream 395628 4515268 ~ 4536025 (+)
G452043 NA other upstream 1386934 3500279 ~ 3500512 (+)
CI01000319_03402932_03447997 BTR26, BTR25, BTR24, BTY, BTR22, BTR18 other upstream 1511053 3402112 ~ 3448275 (+)
G451662 NA other upstream 1596829 3333281 ~ 3334824 (+)
G452541 NA other downstream 406436 5336085 ~ 5353023 (+)
G452545 NA other downstream 420608 5353694 ~ 5356035 (+)
G452543 NA other downstream 426614 5359700 ~ 5371484 (+)
G452735 NA other downstream 775076 5712686 ~ 5712732 (+)
G452884 NA other downstream 1189558 6122644 ~ 6124939 (+)

Expression


Co-expression Network