CI01000319_05435510_05450379


Basic Information

Item Value
gene id CI01000319_05435510_05450379
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000319
NCBI id null
chromosome length 6428943
location 5435229 ~ 5450632 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000319_05435510_05450379.mRNA
CTATAAATGCAGCTTATTTGTGTCCATAGACAGAAACAGTCTGAATGACATAAAATAACCAACAACCTTTTGTTTCATTTTGTGTGACATACAAGGAACAGGTAAATCTGAAATCAGTGATACTACAATTACAGACTGCTGTGGAAAAACTCAAATAATGGCCTAAGAGACATCGCTAGAAACTGATGAACCTGTTTTCACCAGTTTCTATTAATGATTTCTGATGACAACTGGTCAGCCTGCATTTGTTCCATAAATATGATTAAAAATAGTCGACCAATATGGGTTTTTGTCAGTGGATTCCCATAAAAGCGTTGTGTTATTGCTCCGCTAAAGACCCACTAATTCCACTCATCCGCTCCATGTTTTCCCACTTGCTCCCCAGTATCACTCAAAGTTTGTGTCCGCTCTCAGACAAGTGTGTATGGCAGTTCCAGAAGTTCATCCCATTGACAGGTTGCAACACTAACAGAGACGAAAGCACACACAAACGCACACGTATATTTGCCCACGGCTCCTCGCTGCTGAGGTACCACCTGTATTTCAGACACGCAATCTTCGCCACTAGACTCTTGAAGCGAAAATCGATGCAGATCCGCCTCAAAGTGCTCTCTGGAAAACTCTGCCACATTAAAAACAAGCCGACAACCTGTCAGCCACTTTCCCTCCCGTCATGGGGAGCGAGACAGTGGGTCTTACAGATGGCACAAAAAGCATATCTGAAGGCCTTTAGTGTGCACACTAATGAACTAGCACGTTTTAAAAGACGCACATGCAGTCGCTCTGTGTTTTTCAGCAATGTTGTCTTGTTCGAACACAGAAAACGCAAGTATCGAGCCAATCATAAGAGCAAATAAGCTAACAGGACATCTGTAGGTGGACTTAAAGATTCTCACATATACACATACACGCACTTAGTCACATATTATTTTGATTTGCTTAGCATGTGAAGTATGACTAAGTGTTGACTAAGCCCGCATTTCACAAGAATCAGCTTGTGGCTGAGTGGAAAAACGGTTGCCTGTAAAGTCCTAGGGCATTTGTCTGAAAAAGAAATGTGGAACTGTAGGGAAAAAGAAAGCAACTGATAGAAAGTACAGAGCCAAGGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000319_05435510_05450379.mRNA True 1110 mRNA 0.42 4 5435229 5450632

Neighbor

gene id symbol gene type direction distance location
CI01000319_05112104_05116909 NA coding upstream 318155 5111633 ~ 5117074 (+)
CI01000319_04949418_04952350 PDK2B coding upstream 482879 4949305 ~ 4952350 (+)
CI01000319_04931863_04933044 NA coding upstream 502143 4931653 ~ 4933086 (+)
CI01000319_04907275_04915465 WIPF2B coding upstream 519633 4907006 ~ 4915596 (+)
CI01000319_04869169_04900787 PLAK, JUPB coding upstream 534329 4869169 ~ 4900900 (+)
CI01000319_05618356_05625888 FLOT1, FLOT1A coding downstream 167724 5618356 ~ 5626767 (+)
CI01000319_05651284_05669061 KIFC1, ZBTB22B coding downstream 200482 5651114 ~ 5671460 (+)
CI01000319_05684798_05685353 NA coding downstream 233784 5684416 ~ 5685353 (+)
CI01000319_05704764_05712826 NA coding downstream 253451 5704083 ~ 5713885 (+)
CI01000319_05718732_05734284 NA coding downstream 267700 5718332 ~ 5734843 (+)
G452597 NA non-coding upstream 7377 5356088 ~ 5427852 (+)
G452541 NA non-coding upstream 82206 5336085 ~ 5353023 (+)
G452590 NA non-coding upstream 114225 5320045 ~ 5321004 (+)
G452574 NA non-coding upstream 140700 5294318 ~ 5294529 (+)
G452518 NA non-coding upstream 223248 5211768 ~ 5211981 (+)
G452658 NA non-coding downstream 7699 5458331 ~ 5459625 (+)
G452547 NA non-coding downstream 49151 5499783 ~ 5503223 (+)
G452681 NA non-coding downstream 55896 5506528 ~ 5507227 (+)
G452685 NA non-coding downstream 62161 5512793 ~ 5513079 (+)
G452693 NA non-coding downstream 74800 5525432 ~ 5525655 (+)
G452543 NA other upstream 63745 5359700 ~ 5371484 (+)
G452545 NA other upstream 79194 5353694 ~ 5356035 (+)
CI01000319_04787066_04788609 EIF1B, EIF1, GM6900 other upstream 644700 4787040 ~ 4790529 (+)
CI01000319_04515268_04534770 NA other upstream 899204 4515268 ~ 4536025 (+)
G452735 NA other downstream 257530 5712686 ~ 5712732 (+)
G452884 NA other downstream 672012 6122644 ~ 6124939 (+)

Expression


Co-expression Network