CI01000319_05684798_05685353


Basic Information

Item Value
gene id CI01000319_05684798_05685353
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000319
NCBI id null
chromosome length 6428943
location 5684416 ~ 5685353 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000319_05684798_05685353.mRNA
ATATAAAAAACAGCTTTCCATTTTGCTTTTTATTTAACATTTTTGTATTTCCCCAACCATTTATCATGTTTGTTTTTTCTTTTATTTATTTTAGCAAATTTATTGTTATATATATTTATTTATTCATGCACAAATATCTAGATTTATTTATTTATTATTTTACATTTATTTTTGCAAAATTTGTTCTTCATACTTATATGTCTAACGTCTAATAATGACTTTATTTTGTTTTCACTTTTATCAATCCAATCTAAGAAAACCTCATAGTGATTGACGTTGTTCCGCTTGTCCTAAAAATCTATTGGCTGGAATTTACAACCTTGACACTGGAAAATATTTCATGCTCAATCCTGAAGAAGATGTTTTCAGTCAAAGTCCAAACATGCGGACTGTACTTCTTCTGCTCCTTGGAGTTTGTCTCGCCTGTGCAGAAACACACTCTCTGAAATACTTCTGTACTGCTGTGTCTGGAGACATTGACTTCCCAGAGTTCACTATTGTTGGTCTGGTCGATGAAGGGCAGTTCATTTACTTTGACAGCAACACAATGAAAGTTGTGCCGAAGACTGAGTGGATGAGACAGAAAGGAGGAGACAGTTACTGGTACACACAAACGCACCAGGCATTCAGAAACAACATCCAAGTCGCAAAAGAACGGTTCAACCACTCAACAG

Function

NR:

description
Mhc1uxa2 protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000319_05684798_05685353.mRNA True 674 mRNA 0.34 2 5684416 5685353

Neighbor

gene id symbol gene type direction distance location
CI01000319_05651284_05669061 KIFC1, ZBTB22B coding upstream 12956 5651114 ~ 5671460 (+)
CI01000319_05618356_05625888 FLOT1, FLOT1A coding upstream 57649 5618356 ~ 5626767 (+)
CI01000319_05435510_05450379 NA coding upstream 233784 5435229 ~ 5450632 (+)
CI01000319_05112104_05116909 NA coding upstream 567342 5111633 ~ 5117074 (+)
CI01000319_04949418_04952350 PDK2B coding upstream 732066 4949305 ~ 4952350 (+)
CI01000319_05704764_05712826 NA coding downstream 18730 5704083 ~ 5713885 (+)
CI01000319_05718732_05734284 NA coding downstream 32979 5718332 ~ 5734843 (+)
CI01000319_05742834_05745945 NA coding downstream 55978 5741331 ~ 5746141 (+)
CI01000319_05796587_05803719 ABCB3L2 coding downstream 108335 5793688 ~ 5804150 (+)
CI01000319_05812788_05816097 NA coding downstream 127340 5812693 ~ 5816171 (+)
G452769 NA non-coding upstream 6391 5675428 ~ 5678025 (+)
G452705 NA non-coding upstream 29478 5593404 ~ 5654938 (+)
G452805 NA non-coding upstream 95521 5586786 ~ 5588895 (+)
G452804 NA non-coding upstream 101855 5582351 ~ 5582561 (+)
G452690 NA non-coding upstream 122372 5561770 ~ 5562044 (+)
G452735 NA non-coding downstream 25540 5712686 ~ 5712732 (+)
G452820 NA non-coding downstream 53740 5739093 ~ 5739474 (+)
G452821 NA non-coding downstream 64487 5749840 ~ 5750457 (+)
G452748 NA non-coding downstream 66365 5751718 ~ 5752959 (+)
G452543 NA other upstream 312932 5359700 ~ 5371484 (+)
G452545 NA other upstream 328381 5353694 ~ 5356035 (+)
G452541 NA other upstream 337422 5336085 ~ 5353023 (+)
CI01000319_04787066_04788609 EIF1B, EIF1, GM6900 other upstream 893887 4787040 ~ 4790529 (+)
CI01000319_04515268_04534770 NA other upstream 1148391 4515268 ~ 4536025 (+)
G452884 NA other downstream 437291 6122644 ~ 6124939 (+)

Expression


Co-expression Network