CI01000319_05704764_05712826


Basic Information

Item Value
gene id CI01000319_05704764_05712826
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000319
NCBI id null
chromosome length 6428943
location 5704083 ~ 5713885 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000319_05704764_05712826.mRNA
CTATAAATTCCCTGGGAATTCCTCTGGAAGGAGCTCTCTGTCTCTTTGATTGTGTTAGCTGGTGGAAATGTAGTGTGACAGATTGTGATTTCTGTGATCTCTGCCTTAACCGAGTGCTGTTTTGATACAGTGTGACCCTTATGCCTAGAACATTAATGTCCTATTGATCCTGTCTGTAACTTCTTAATTATTTTGGCCTTGGCCTATAAGTGCCTTGGGTTTTGTTTTTGTTTTTTTTGTAGGCCAAACAGCCATCACTTTTTCTCTTGTTTATTGGTTAGATAAGGAGATATGGTCACTTATTGAGCGAATGTGTTGTTTCTTTTATTTTGATTAGTAGGGAAGGCAGTTCTTTTGTGAGAAAGTTAGTTTCTGTTTGTTTATTGTTTTGGCATTAGCTCACCCCGGAAGATTTTACTTTCAAATTGTTTTCTTTTTTTCAGGAAATGTTTTACACACGATAAGAATAACGCCTCAAAAACGAACAAGAGAACAATAAAATAAAATAAAAAATGAGTAATTAAGAAGTATTGTTGTGTCATTTGTTACACCCTGACTAGACCAGGGATCATAACAATGATGAACTTAAACTGTAACTGATCCAAGACCTGTATCATTACAAATATATATATATATATATATATATATATATATATTATAAATATTTTTTTTACTCACAGCATGGGTCGGTTGTATCAGAAGAACAAAGGACTATGCAATGATGCGGTCGTAGTGATTGTGCTTCTTGGAGTTCATCTAGCCTATGCTGGAACACACTCTCTGAAATACTTCTACACTGGTGCGTCTGGAGACATTGACTTCCCAGAGTTCACAGCGGTTGGTCTGGTGGATGATGGGCAGTTCATGTACTTTGACAGCAACATAATGAAAGCTGTGCCAAAGACAGAGTGGATCAGACAGAATGAGGGAGCAGATTACTGGGACAGAGAGACTCAGGTCCTGATTGGCAGCCGTCAGGTCTTCAAAGACAACATCCAGATTGCAAAGGAACGGTTTAACCAGTCAAAGGGTGTGCACACAGTTCAGATAATGTACGGCTGTGAATGGGATGATCAGACTGGAGAAACAGATGGGTTCTGCCAGTACGGTTATGATGGAGAGGACTTTCTGTCTCTGGATTTGAAGGAGATGAGATGGATTACCCCAGTACCACAAGGAATCATCACCGCACATAAGTGGAACAATGACAGAGCTAATCTTGAGGGCAGAAAACATTACTTCAGCACTGAGTGTATTGAGTGGCTGAAGAAGTATCAGGAGTATGGAAAGAGCAGCCTGCAGAAAACAGTTTCTCCTCAGGTGTCTCTGTTGCAGAAGAATCCCTCTTCTCCAGTGACGTGTCATGCTACAGGTTTTTACCCCAGTGGAGTAACAATCACCTGGATGAAAAATGGACAAGATCATTATGAGGATGTGGATCTTGGTGAACTTCTTCCTAATGAGGACGGAACCTTCCAGAGGACGAGCACCATCAGAGTTACACCTGATGAGTGGAAGAAGAACGAGTTCATCTGTGTGGTGGAACATCAGGGCAAGACCGTGACAGAGAAAAAGATCAGGGCGAAGAATGCCTCTGATAACTCCTCTAGTCAAAGAAGCAGGTCACAACGTGATTGAGAGAACTGATCCTGACAAATAATGTCCAGCCTTCTGCCATAGATCTCTCAGAGAGATGAACACAAACACATTCTCTTCTTCTGTCTCTCTCCATATATATAGAGGAGGAAACAATCGAAATATAGAAGATGTTTCCTAATTTGACTGTATTAGCAAAACAAGTTAGTTGTAAGGGTCCTTTGTTAGTTACTGAAAGACCCATGTGTTTAGATTTGTGTACAAGTACTGGTAAAGCATTTTATAAAATGTGTGTTAAAGTTTTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000319_05704764_05712826.mRNA False 1903 mRNA 0.40 7 5704083 5713091

Neighbor

gene id symbol gene type direction distance location
CI01000319_05684798_05685353 NA coding upstream 18730 5684416 ~ 5685353 (+)
CI01000319_05651284_05669061 KIFC1, ZBTB22B coding upstream 32623 5651114 ~ 5671460 (+)
CI01000319_05618356_05625888 FLOT1, FLOT1A coding upstream 77316 5618356 ~ 5626767 (+)
CI01000319_05435510_05450379 NA coding upstream 253451 5435229 ~ 5450632 (+)
CI01000319_05112104_05116909 NA coding upstream 587009 5111633 ~ 5117074 (+)
CI01000319_05718732_05734284 NA coding downstream 5241 5718332 ~ 5734843 (+)
CI01000319_05742834_05745945 NA coding downstream 28240 5741331 ~ 5746141 (+)
CI01000319_05796587_05803719 ABCB3L2 coding downstream 80597 5793688 ~ 5804150 (+)
CI01000319_05812788_05816097 NA coding downstream 99602 5812693 ~ 5816171 (+)
CI01000319_05816948_05819499 PSMB8F coding downstream 103734 5816825 ~ 5819499 (+)
G452769 NA non-coding upstream 26058 5675428 ~ 5678025 (+)
G452705 NA non-coding upstream 49145 5593404 ~ 5654938 (+)
G452805 NA non-coding upstream 115188 5586786 ~ 5588895 (+)
G452804 NA non-coding upstream 121522 5582351 ~ 5582561 (+)
G452690 NA non-coding upstream 142039 5561770 ~ 5562044 (+)
G452820 NA non-coding downstream 26002 5739093 ~ 5739474 (+)
G452821 NA non-coding downstream 36749 5749840 ~ 5750457 (+)
G452748 NA non-coding downstream 38627 5751718 ~ 5752959 (+)
G452825 NA non-coding downstream 141864 5854955 ~ 5855198 (+)
G452543 NA other upstream 332599 5359700 ~ 5371484 (+)
G452545 NA other upstream 348048 5353694 ~ 5356035 (+)
G452541 NA other upstream 357089 5336085 ~ 5353023 (+)
CI01000319_04787066_04788609 EIF1B, EIF1, GM6900 other upstream 913554 4787040 ~ 4790529 (+)
CI01000319_04515268_04534770 NA other upstream 1168058 4515268 ~ 4536025 (+)
G452884 NA other downstream 409553 6122644 ~ 6124939 (+)

Expression


Co-expression Network