Gene
RNA
| Item | Value |
|---|---|
| gene id | CI01000319_05978795_05979500 |
| gene name | NA |
| gene type | coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000319 |
| NCBI id | null |
| chromosome length | 6428943 |
| location | 5978195 ~ 5979549 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| Zgc:112105 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| CI01000319_05978795_05979500.mRNA | True | 1015 | mRNA | 0.36 | 3 | 5978195 | 5979549 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000319_05974099_05976045 | CCDC127B | coding | upstream | 2140 | 5974099 ~ 5976055 (+) |
| CI01000319_05887712_05890105 | HSD17B8 | coding | upstream | 87401 | 5887518 ~ 5890794 (+) |
| CI01000319_05882023_05885700 | NA | coding | upstream | 92390 | 5882023 ~ 5885805 (+) |
| CI01000319_05872448_05880610 | BRD2A, BRD2 | coding | upstream | 97585 | 5871950 ~ 5880610 (+) |
| CI01000319_05828294_05834113 | NA | coding | upstream | 143110 | 5828007 ~ 5835085 (+) |
| CI01000319_05981549_05984687 | NA | coding | downstream | 2000 | 5981549 ~ 5985215 (+) |
| CI01000319_06031126_06031401 | NA | coding | downstream | 51577 | 6031126 ~ 6033230 (+) |
| CI01000319_06044073_06049600 | NA | coding | downstream | 64524 | 6044073 ~ 6049961 (+) |
| CI01000319_06054270_06057766 | SF3B4 | coding | downstream | 74298 | 6053847 ~ 6057899 (+) |
| CI01000319_06070748_06083546 | FAM63A | coding | downstream | 88582 | 6068131 ~ 6083764 (+) |
| G452784 | NA | non-coding | upstream | 10866 | 5966890 ~ 5967329 (+) |
| G452798 | NA | non-coding | upstream | 26984 | 5947541 ~ 5951211 (+) |
| G452826 | NA | non-coding | upstream | 121586 | 5856405 ~ 5856609 (+) |
| G452825 | NA | non-coding | upstream | 122997 | 5854955 ~ 5855198 (+) |
| G452748 | NA | non-coding | upstream | 225236 | 5751718 ~ 5752959 (+) |
| G452856 | NA | non-coding | downstream | 6159 | 5985708 ~ 5986065 (+) |
| G452880 | NA | non-coding | downstream | 71818 | 6051367 ~ 6051568 (+) |
| G452760 | NA | non-coding | downstream | 79000 | 6058549 ~ 6060505 (+) |
| G452881 | NA | non-coding | downstream | 83469 | 6063018 ~ 6064372 (+) |
| G452768 | NA | non-coding | downstream | 106290 | 6085839 ~ 6088623 (+) |
| G452735 | NA | other | upstream | 245259 | 5712686 ~ 5712732 (+) |
| G452543 | NA | other | upstream | 606711 | 5359700 ~ 5371484 (+) |
| G452545 | NA | other | upstream | 622160 | 5353694 ~ 5356035 (+) |
| G452541 | NA | other | upstream | 631201 | 5336085 ~ 5353023 (+) |
| CI01000319_04787066_04788609 | EIF1B, EIF1, GM6900 | other | upstream | 1187666 | 4787040 ~ 4790529 (+) |
| G452884 | NA | other | downstream | 143095 | 6122644 ~ 6124939 (+) |
