CI01000319_06031126_06031401


Basic Information

Item Value
gene id CI01000319_06031126_06031401
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000319
NCBI id null
chromosome length 6428943
location 6031126 ~ 6033230 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000319_06031126_06031401.mRNA
AACCAGTGCCTGCAATCAGTGTGCCATTTGAAATATCTTGGCACTAGGATATCCGATGAGGGATCCAAACCAGAAATTATGGCCAGGATAGCCCAGACTACAACAGCACTTGCCAGACTGAAGCCAATACGGAGGAACAAGAACAACACCTTTAGATTAAAGCTCAGACTTATGCATGCTCTGGTTATCTCAATCTTCCTGTATGCATGTGAATTGTGGACACTGATGGCTGAGCATGAGAAGAAAATACAGGCCTTGGATATGCGATGCTTTTAAAAGATTCTGGGCATCAGCTACAAAGACCATGTGACCAATGAGGAAGTGTGCTACCCCATTAGGCAGCATGCTTTGCCCTATGAAGAACTCCTGGCAACTGTCAAAAGAAGGAAATTACAGTGGCACCAGATCCTCCGGGCTGGCCAAAACCATTCTCCAGGGCGCAGTTGAAGATACAAGAAGGAGAGGGAGACCAAGGAAAAACTGGGCAGACAATGGAAAGAATGGATTGGAGCTGACTTTACTAAGACATAAGGAACAAACACAATATTCCTCATTTAAACAATTCCCGTCAATGGCATATGCAAAATAAAAGGGATGAGGCCTGGTTGAGTTGTGTTAATAGTTGAAATTCACAGTGATGGAATGGGCGTGACATTTCGTGACAAAACAACATGAGGAGCTGCACGAGAGGCAGGCCTGGTTCTAGACCCCTCAAACGAAAAATCAAGACCACCCTTAGTTGATACTGTAATAATATAGGCAAAACTGATTTGACAAATGCTCCAGTGTGCATTTGTGTTTGTGCTCTGGAGAGTATCAAAGGTTTTTACAATGTGTTTTTGCAGCATTGAGCAATGAAGCCAATCACAGACATGTCTGTTGATCTCAATGACCAATCAGAGGTGTTTAAGAATCCACCAACCACTCAAAACATCAGAGTTTTGTTCAGTGCTGAGTTCTGCTGGCTCGTGAATCTTCTCTTTATAACAAATGAAGTGCAGACATGAAACGATGTTTAAAAAAATAAAAAATAAAAAGATTTATTGTGCTGTGTAGACAGCTTCATTGATTATAATGAAACTTTGTGAGATCGCGATGAACTGAGATGAAGGACAGCTTTTTATTATATGGAATGCTCTTTGTGCGCGTTTATGCCAGTCCCTTTAGATTACAATATGTTTACGATAAAGTTGACATCAATGACAAAAAACTTAACAGTTGACAATGTTATGTATCTAAAATTTCAAAAATGCTTTAATAGTGAAACAAGTCAAAGATCTTGAAAAAAATCTTTTTTTTTCCCAGGAACTAGGGACTTTGGTACTCTGTGTGTTTCGACCACAGGGACCAGGGTCTAAATAAAGTTCTGGGTAAAAAGAGGGTTCATAATATTGATTCTGGGTTGATATGTTAGCTGGTGGATTTTTTTTTTAACCGAAAGGTCTCAACGTGTGAAGGTAAACAGTGTATTATCTGATGTACTTTTTTTCTCTACTGGGTCACTGCAGGGATGTGTTTTCACCTATTTTATTTGTGTTTTATACTAATGAGTGTCAGACGCAACTAGAGAGGCGTCACATCAAGTTTGCAGAAGATTCAGTGATTGTTTCCCTCCTTAATAATGAGGATCCTGATCATGGTTCTGTACTGGCAGACTTTACTGATTGGTGTAATTTGTCCTTTTTGGACATTAATGTATTTAAAACTAAAGAGATGAATATAGATTTTAGGAAGAATCCCACAGTCATCTGCCCTGTAGTTATAAATTATCATGCTGTTGAGGTTGTACATCAGTTTATAAAAAAAAAAAAAAAAAAAAAAAAAGGGTACTGTAATTGATAAACAGTTGATTTTTGAGGCTCAGGTAGATGCTGTGTGTAAGAAAGCCCACCAGCGCTTATATTTTCTACGGAAGCTTTGTGGTTTTAATGTGGACAGTACTTTTATGAAAATGTTTTATTCTTGTTTTATTGAATCCGTTATTACTTTTTCATTTGTGTGCTGGTATGGGTCACTTAATCTTACAAACAGAAACAGATTACGGGGCATTGTTAAAGTGTGTGGTAAGATTGTTGGCACCACTTTGAATGATTTGAACAATTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000319_06031126_06031401.mRNA True 2105 mRNA 0.38 1 6031126 6033230

Neighbor

gene id symbol gene type direction distance location
CI01000319_05981549_05984687 NA coding upstream 45911 5981549 ~ 5985215 (+)
CI01000319_05978795_05979500 NA coding upstream 51577 5978195 ~ 5979549 (+)
CI01000319_05974099_05976045 CCDC127B coding upstream 55071 5974099 ~ 5976055 (+)
CI01000319_05887712_05890105 HSD17B8 coding upstream 140332 5887518 ~ 5890794 (+)
CI01000319_05882023_05885700 NA coding upstream 145321 5882023 ~ 5885805 (+)
CI01000319_06044073_06049600 NA coding downstream 10843 6044073 ~ 6049961 (+)
CI01000319_06054270_06057766 SF3B4 coding downstream 20617 6053847 ~ 6057899 (+)
CI01000319_06070748_06083546 FAM63A coding downstream 34901 6068131 ~ 6083764 (+)
CI01000319_06100790_06101982 MRPL24 coding downstream 66976 6100206 ~ 6102078 (+)
CI01000319_06103395_06107623 NA coding downstream 70030 6103260 ~ 6108482 (+)
G452856 NA non-coding upstream 45061 5985708 ~ 5986065 (+)
G452784 NA non-coding upstream 63797 5966890 ~ 5967329 (+)
G452798 NA non-coding upstream 79915 5947541 ~ 5951211 (+)
G452826 NA non-coding upstream 174517 5856405 ~ 5856609 (+)
G452825 NA non-coding upstream 175928 5854955 ~ 5855198 (+)
G452880 NA non-coding downstream 18137 6051367 ~ 6051568 (+)
G452760 NA non-coding downstream 25319 6058549 ~ 6060505 (+)
G452881 NA non-coding downstream 29788 6063018 ~ 6064372 (+)
G452768 NA non-coding downstream 52609 6085839 ~ 6088623 (+)
G452792 NA non-coding downstream 81271 6114501 ~ 6116089 (+)
G452735 NA other upstream 298190 5712686 ~ 5712732 (+)
G452543 NA other upstream 659642 5359700 ~ 5371484 (+)
G452545 NA other upstream 675091 5353694 ~ 5356035 (+)
G452541 NA other upstream 684132 5336085 ~ 5353023 (+)
CI01000319_04787066_04788609 EIF1B, EIF1, GM6900 other upstream 1240597 4787040 ~ 4790529 (+)
G452884 NA other downstream 89414 6122644 ~ 6124939 (+)

Expression


Co-expression Network