CI01000319_06044073_06049600


Basic Information

Item Value
gene id CI01000319_06044073_06049600
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000319
NCBI id null
chromosome length 6428943
location 6044073 ~ 6049961 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000319_06044073_06049600.mRNA
GCATATGTTGATGTTTACAAATCTCAAGTATCTGGTCTACATTAATACCTACTATGGCATCCTAAGAGCCAAGCATGATTCACTAAAAGCTCTTGCTGGAAAACACAATTGCATTATTGAACCAGGTAATGCGTCAGCAAATCCAGTGTATGTGTCATATCATGCCGTGTTTATGATTACACCTGTCATAGACTACCATTCACACTATGCCAGCATTAGCGTTCTGAGAGTGCTATTAAATGACCGGAACATACCATCACATCCTGAGAATGTGGCAAGATATGCAGGCAGAAATCAACGCCAGACACCATCCTTTCTTAACAACTTTCTTATTGTTTTTCCTTGTTCAGGAGCATGTGCACGTGTTGCCAGTAACATCTACAGTAAACACAGACAGGCTTGCACTATGGCTAATACTATTAAGTACCTGGGACAAGAAGAGGCTCAGCACATTGACGAGGAGCTGTTTAATGAGTACAGCTTCAGCGTGGATCAGCTGATGGAGTTGGCCGGGCTTAGCTGTGCCACAGCTGTGTCAAAGGGTTATGAACCATCTGTATTGTACCCAAAGCGCCCCAACAAACAGCTGTTTCAGAATCTTACCACCCAGTGTGAGAAGATGGATATATCCTTCCTGTCAGAGATACCTGAGGCTGATGTGATTGATGAAGCTTATAACTTGGTGGTGGACGCCATCTTTGGATTCAGTTTTAAGGGTGCGGTGCGTGAGCCATTCGGAGACATCCTCTCCCAACTAAAGAAAATCACTGTTCCCATTGCTAGCGTCGACATACCTTCAGGCTGGGATGTGGAGAAAGGCTGTCCTGATGGGATTCAGCCTGACATGCTCATCTCCCTCACGGCCCCTAAGAAGGCGGCCAATCACTTCAAAGGACGCTATCACTTCCTGGGAGGACGATTCGTTCCTCCTGCACTTGAACAGAAGTACCAGCTGAACCTGCCTCAATACCCAGGCACTGACTGTGTGTATCAGCTGAACTGAACATCTCACTTTTGTGTCACTAATCAAAAAGAAACCTGGAATGAATATACTGATGAGTTATAAATGTATGTTTACCACTCTGAATACTTCTTCTGCTTTTCTTATAATGGGTAGATATGGACTTGATGAATAAGGACGTTTAAAGATATTGATTCTTTATTGCCAAGATTGTTAGAGAATGTTTCAAAGGAACCGCTCTGATTAGTTAAGGATTTATAAAAACCTCTAAATAAAATAAATAAATAAATATTTAATTCTAGTTTTTGATGGTTTTGGGATTTATTGACTAAGCCAGAGTAATTACTGTATTATTGTTTTGTGTTTAAGTATATTGGTTACATACGGAAATATTTCAAATGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000319_06044073_06049600.mRNA True 1364 mRNA 0.41 8 6044073 6049961

Neighbor

gene id symbol gene type direction distance location
CI01000319_06031126_06031401 NA coding upstream 10843 6031126 ~ 6033230 (+)
CI01000319_05981549_05984687 NA coding upstream 58858 5981549 ~ 5985215 (+)
CI01000319_05978795_05979500 NA coding upstream 64524 5978195 ~ 5979549 (+)
CI01000319_05974099_05976045 CCDC127B coding upstream 68018 5974099 ~ 5976055 (+)
CI01000319_05887712_05890105 HSD17B8 coding upstream 153279 5887518 ~ 5890794 (+)
CI01000319_06054270_06057766 SF3B4 coding downstream 3886 6053847 ~ 6057899 (+)
CI01000319_06070748_06083546 FAM63A coding downstream 18170 6068131 ~ 6083764 (+)
CI01000319_06100790_06101982 MRPL24 coding downstream 50245 6100206 ~ 6102078 (+)
CI01000319_06103395_06107623 NA coding downstream 53299 6103260 ~ 6108482 (+)
CI01000319_06133262_06139477 PBXIP1A coding downstream 83301 6133262 ~ 6140633 (+)
G452856 NA non-coding upstream 58008 5985708 ~ 5986065 (+)
G452784 NA non-coding upstream 76744 5966890 ~ 5967329 (+)
G452798 NA non-coding upstream 92862 5947541 ~ 5951211 (+)
G452826 NA non-coding upstream 187464 5856405 ~ 5856609 (+)
G452825 NA non-coding upstream 188875 5854955 ~ 5855198 (+)
G452880 NA non-coding downstream 1406 6051367 ~ 6051568 (+)
G452760 NA non-coding downstream 8588 6058549 ~ 6060505 (+)
G452881 NA non-coding downstream 13057 6063018 ~ 6064372 (+)
G452768 NA non-coding downstream 35878 6085839 ~ 6088623 (+)
G452792 NA non-coding downstream 64540 6114501 ~ 6116089 (+)
G452735 NA other upstream 311137 5712686 ~ 5712732 (+)
G452543 NA other upstream 672589 5359700 ~ 5371484 (+)
G452545 NA other upstream 688038 5353694 ~ 5356035 (+)
G452541 NA other upstream 697079 5336085 ~ 5353023 (+)
CI01000319_04787066_04788609 EIF1B, EIF1, GM6900 other upstream 1253544 4787040 ~ 4790529 (+)
G452884 NA other downstream 72683 6122644 ~ 6124939 (+)

Expression


Co-expression Network