CI01000319_06373867_06384385


Basic Information

Item Value
gene id CI01000319_06373867_06384385
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000319
NCBI id null
chromosome length 6428943
location 6373484 ~ 6384471 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000319_06373867_06384385.mRNA
CTTTATAAGGGAAGGTTGTTTATCCTCTGTTTAATCAGGGAAGGTGGTGTGTTAACAGAATAGTCATACTCTACTTTGCTAGAGAAGAAGGTTCATCCTCTGTTAATTCAGGGAAGGTTACAACTGTTACAGTGTGTAAGCAAGTTGGTTCTACTCTGCTTACCAGAGAAGGTTGAATATATTACGATGTGTATTAACTAGGTTAACCTCTGCTCTGTCAGGGAAGTGTTGAAGTGTATTGTTGTGCCAGAAAGACTAATTCCAACAACTGAGAAAGGTGGACTAGCTACCCCTTTATGGACAGATAGTGAGTTCAAATCATTGTTAGGAAAGCACATGGACTCAATAGTGACTGAGTCCGTCAGATTGGATTTGACAAAGAAATGTGGGATTCATCCATAAAAGTTTGGTCCATTGAAGAATGCAAAAAGGTACTTGGTGCTTGTATTCAGAAGAAAAATATGAAGGGCATTATCTGCTGCCACAGAGAATTTACTCTATCCATTGCACAAGAACAAATCCAACATATTGCTAAGTTAGAAGAGCAGAACAAACAGTTGCACACTCGAGTTTCTCGTCTCACTCAGAAGCTAGGCCTCAACAAAGCCTCAACCAAATGTGACTCAAAAGACCAACAGTCAGATGAAAGCTATCCTGACTTACAGTCTTTCTGTAGACTAGAGGATAATAGCAATACTGGATTGATGGATAAAGATGTAAATGCAGTTGAAGTGTTTGGAGCGAGACAAAAGGCTCAGAGTAGGGTAAAAGTGGTTGACGCAGTTCCATCTACAACCCACATCCTACAGTTACAAGCAGTCAGTACCGCTCTAGGTCCTGAAGACATAGAAAGACTTGCTGAGAGTTTGCCATCAGTGCATAGAAATTTTTCTGAGTTTAGGTCAGAGTTGTCCAGAAAAATGAAGCTCTATGATATGTCCCTAGCTGAAGTCACCCAGCTAATGTCACAAATCCTGAAAGAGTCAGAATTCAATGATTTTGAAAGTGCTGTAAATAATTCTGAGTTTCAGCATTCCAGCAAAGCTGCAGCATACAGTGGAATAGCTGACACTCAAGAGAAGGTGTTAGAGGATAATGGACCACTGGTCCGCATGTGGTTTGATTGGCTTTCATCAGAATACAGAAATGCATTGCCTTTCTTAGACCTCATATGGTCCAATGGAACGCTGCAAAACAACTTGGATAGGTTAGCTATTTGGGAAAGAGACTCAGATGTCAAGACAAAAGTAAAGATTGCAGCAGCATCCTTTAAGGTCAACACAGAGAAACAACAGAGACGTAAATGTCCTAAGAGAGAAGGCAGTTGTCATTACTGTGAAGCCCTTAGAGGCAAAACCTGCAGTCTGAGACATGTGCGATATTACACTTTCGCTCCCTCTCTGAACTACGACAGTTCATTAGAGAGAGAACACGCTCTTGAGAGAGACACACTCACATGGAGACTGAGTTCAGCTCCAAACCCCAGAAAATCACACTCTGACTGGGTCTTTGGAATTAGGTGTGATGTAGCATTTGTGGGCTGCCAAATTCCAGCGGCCCATTTCTTTAAGGGTAGTGATGGTACTCTTGGAATGCTGACATTGCTGCGCCGATTCTGGATGAGTGAGAGCCATAGAACGCCTGCTAGCTTGGACAGCTTGACAACAAGGCATTATAACAGGCCTGGTGAATGGACGCGGAAAGCGATCCATTTTGCCGAGGAGAACAGGCTTGGGAGTGAGTCGGACAGGCATAAATCAGAGTGCCATGCTACAGTGCACAGAGAAATCAATAGCCTCTTCGGCGTGTTTATGGCCCATACACACAACACAGTAAGGATGGAAATCCCTAGCGGCGAAAAGGGCGCCGCACTCGGCAGGGCAGGCACGAGACTGGTAGTCCCCGGGGGGCCGTTGTGGGTTAGAGAGCATCAAAGAAATAAATGCATAGTCCGACAGGCGGGCAGCTGTAGAACAGGGGAAAATAGTGAAGAGAGCGAGGCAGGCAGCCTGCTAAACAATGCGAGCACGGGTGGCTTGCAGTAATTCAGCTAACCTGGTTGATTTAACAAACACATCCAGCGGAGGCTGATCTCAAAAGATGTGTCCTCCTGCAGACAATAGTGAAGTCC
>TU521026
GGATAGGTTAGCTATTTGGGAAAGAGACTCAGATGTCAAGACAAAAGTAAAGATTGCAGCAGCATCCTTTAAGGTCAACACAGAGAAACAACAGAGACGTAAATGTCCTAAGAGAGAAGGCAGTTGTCATTACTGTGGTAAACCTGGACATTGGATGAAAGAGTGTATGAAAAACAAAAAGACATTTAAAGAAATGAACAGCTTTACTCAGCTCCTACTCAGTCTACTTGCTACATTGAAACTGCCCCTCCCCTCTTCTCCAAACTCTTGGAGCAACAGCTTACTGACATGCTAACCATTTAGGCTGTGAGTGCTTAATTTCCCCATTTACAAGAAAGCTGAAAGACTCATTCTGAACAAAAGAAAGTTGACTGTCACTTCCACCATTTAGGGACACTAGTTAAGTATACTCACAGCCTTAAATGTTATGCTACAGCACACTTCAGTCACTTATCCATCCTCTATG

Function

NR:

description
PREDICTED: 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000319_06373867_06384385.mRNA False 2131 mRNA 0.44 6 6373484 6384471
TU521026 True 466 lncRNA 0.40 1 6374820 6375285

Neighbor

gene id symbol gene type direction distance location
CI01000319_06331800_06332394 NA coding upstream 41081 6331800 ~ 6332403 (+)
CI01000319_06321729_06328918 NA coding upstream 43830 6321729 ~ 6329654 (+)
CI01000319_06316911_06319511 CKS1B.L, BRAFLDRAFT_59154, CKS1, CKS1B, CKS1B.S, CKS2 coding upstream 53915 6316836 ~ 6319569 (+)
CI01000319_06299220_06303590 AQP10B coding upstream 69245 6299220 ~ 6304239 (+)
CI01000319_06289240_06294387 NA coding upstream 78681 6288877 ~ 6294803 (+)
CI01000319_06396614_06408857 NA coding downstream 11749 6396220 ~ 6409348 (+)
G452895 NA non-coding upstream 143536 6229616 ~ 6229948 (+)
G452782 NA non-coding upstream 255299 6116267 ~ 6118185 (+)
G452792 NA non-coding upstream 257395 6114501 ~ 6116089 (+)
G453830 NA non-coding downstream 3957 6388428 ~ 6388654 (+)
G453837 NA non-coding downstream 32071 6416542 ~ 6416742 (+)
G452884 NA other upstream 248545 6122644 ~ 6124939 (+)
G452735 NA other upstream 640548 5712686 ~ 5712732 (+)
G452543 NA other upstream 1002000 5359700 ~ 5371484 (+)
G452545 NA other upstream 1017449 5353694 ~ 5356035 (+)
G452541 NA other upstream 1026490 5336085 ~ 5353023 (+)

Expression


Co-expression Network