Gene
RNA
| Item | Value |
|---|---|
| gene id | G451485 |
| gene name | NA |
| gene type | unknown |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000319 |
| NCBI id | null |
| chromosome length | 6428943 |
| location | 2742741 ~ 2744523 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU518358 | True | 1032 | TUCP | 0.48 | 2 | 2742741 | 2744523 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000319_02701298_02702362 | NA | coding | upstream | 40262 | 2701178 ~ 2702479 (+) |
| CI01000319_02680296_02690985 | CSK21, CSNK2A1 | coding | upstream | 50204 | 2680145 ~ 2692537 (+) |
| CI01000319_02589828_02606166 | HSF1 | coding | upstream | 136424 | 2589710 ~ 2606317 (+) |
| CI01000319_02555778_02557068 | SCX, SCXA | coding | upstream | 185512 | 2555349 ~ 2557229 (+) |
| CI01000319_02447968_02451102 | HGH1, BRP16 | coding | upstream | 291623 | 2447968 ~ 2451118 (+) |
| CI01000319_02908622_02913138 | NA | coding | downstream | 163925 | 2908448 ~ 2913296 (+) |
| CI01000319_02974439_02975143 | NA | coding | downstream | 229852 | 2974375 ~ 2976447 (+) |
| CI01000319_02979402_02979695 | NA | coding | downstream | 234663 | 2979186 ~ 2979818 (+) |
| CI01000319_03011414_03016792 | NA | coding | downstream | 265042 | 3009565 ~ 3017195 (+) |
| CI01000319_03020934_03021218 | NA | coding | downstream | 276243 | 3020766 ~ 3021563 (+) |
| G451473 | NA | non-coding | upstream | 36693 | 2705798 ~ 2706048 (+) |
| G451472 | NA | non-coding | upstream | 38426 | 2704104 ~ 2704315 (+) |
| G451471 | NA | non-coding | upstream | 39010 | 2703515 ~ 2703731 (+) |
| G451464 | NA | non-coding | upstream | 45711 | 2696674 ~ 2697030 (+) |
| G451463 | NA | non-coding | upstream | 48431 | 2693717 ~ 2694310 (+) |
| G451479 | NA | non-coding | downstream | 20660 | 2765183 ~ 2765824 (+) |
| G451454 | NA | non-coding | downstream | 29799 | 2774322 ~ 2882238 (+) |
| G451458 | NA | non-coding | downstream | 124939 | 2869462 ~ 2871307 (+) |
| G451558 | NA | non-coding | downstream | 167330 | 2911853 ~ 2912089 (+) |
| G451562 | NA | non-coding | downstream | 170548 | 2915071 ~ 2915304 (+) |
| G451357 | NA | other | upstream | 251448 | 2467916 ~ 2491293 (+) |
| G451367 | NA | other | upstream | 260320 | 2481064 ~ 2482421 (+) |
| CI01000319_02344195_02381474 | NA | other | upstream | 363690 | 2344195 ~ 2381474 (+) |
| CI01000319_02180899_02201030 | NA | other | upstream | 540596 | 2180899 ~ 2202145 (+) |
| CI01000319_01965186_01970285 | NA | other | upstream | 775562 | 1965166 ~ 1970322 (+) |
| G451500 | NA | other | downstream | 93563 | 2838086 ~ 2838949 (+) |
| G451677 | NA | other | downstream | 471817 | 3216340 ~ 3229331 (+) |
| G451662 | NA | other | downstream | 588758 | 3333281 ~ 3334824 (+) |
| CI01000319_03402932_03447997 | BTR26, BTR25, BTR24, BTY, BTR22, BTR18 | other | downstream | 657927 | 3402112 ~ 3448275 (+) |
| G452043 | NA | other | downstream | 754803 | 3500279 ~ 3500512 (+) |
