G451682


Basic Information

Item Value
gene id G451682
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000319
NCBI id null
chromosome length 6428943
location 3172160 ~ 3259168 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU518618
TAAAAAGTACAAGATATTAGGAACTGAAATGATGAAAATAAATGATCGTCATCCTTTAAGGAGCAGCACATTGAACTAAGAACAACAAAACAGACAAGAAAAAACTGCTTTGTCCTTTGAACAAATGAGACAAAACTGGAGCTTTCAGGAAAGTCACATCAGCTCTGGGCTCACAGACCAAAAAAAAAAAAAAAAAAAAGCTTTCAAAGAAAAGAACATTATACCCGCTGTGAAACACAGAGGAGCTTGATCATGTTTTTGGGCTTCTTTGATGCATCTGGCATGGGATGCCTTGAATCTGTACAGGGTAAAATGAAATCAAGGCATTCTGAGAAACATATTTTCAGAAATAACTTATGTTCCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU518618 True 365 lncRNA 0.36 2 3172160 3259168

Neighbor

gene id symbol gene type direction distance location
CI01000319_03139476_03152542 NEDD9 coding upstream 19590 3139373 ~ 3152570 (+)
CI01000319_03125942_03128108 NA coding upstream 43632 3125866 ~ 3128528 (+)
CI01000319_03067481_03071297 NA coding upstream 100813 3066768 ~ 3071477 (+)
CI01000319_03020934_03021218 NA coding upstream 150597 3020766 ~ 3021563 (+)
CI01000319_03011414_03016792 NA coding upstream 154965 3009565 ~ 3017195 (+)
CI01000319_03283470_03293866 OSCP1A coding downstream 24263 3283431 ~ 3293926 (+)
CI01000319_03295425_03299640 LSM10 coding downstream 36257 3295425 ~ 3300676 (+)
CI01000319_03307678_03308097 NA coding downstream 47316 3306484 ~ 3308463 (+)
CI01000319_03389749_03391750 NA coding downstream 130581 3389749 ~ 3391991 (+)
CI01000319_03394244_03396334 BTR26, BTR18, BTY, BTR25, BTR22 coding downstream 135076 3394244 ~ 3396614 (+)
G451655 NA non-coding upstream 9792 3114527 ~ 3162368 (+)
G451653 NA non-coding upstream 92393 3079555 ~ 3079767 (+)
G451652 NA non-coding upstream 93232 3078726 ~ 3078928 (+)
G451651 NA non-coding upstream 93603 3078271 ~ 3078557 (+)
G451663 NA non-coding downstream 35483 3294651 ~ 3329012 (+)
G451666 NA non-coding downstream 91571 3350739 ~ 3375767 (+)
G451741 NA non-coding downstream 117261 3376429 ~ 3376706 (+)
CI01000319_03402932_03447997 BTR26, BTR25, BTR24, BTY, BTR22, BTR18 non-coding downstream 145029 3402112 ~ 3448275 (+)
G451500 NA other upstream 333211 2838086 ~ 2838949 (+)
G451485 NA other upstream 427637 2742741 ~ 2744523 (+)
G451357 NA other upstream 680867 2467916 ~ 2491293 (+)
G451367 NA other upstream 689739 2481064 ~ 2482421 (+)
CI01000319_02344195_02381474 NA other upstream 793109 2344195 ~ 2381474 (+)
G451662 NA other downstream 74113 3333281 ~ 3334824 (+)
G452043 NA other downstream 240158 3500279 ~ 3500512 (+)
CI01000319_04515268_04534770 NA other downstream 1272451 4515268 ~ 4536025 (+)
CI01000319_04787066_04788609 EIF1B, EIF1, GM6900 other downstream 1527872 4787040 ~ 4790529 (+)

Expression


Co-expression Network