G451663


Basic Information

Item Value
gene id G451663
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000319
NCBI id null
chromosome length 6428943
location 3294651 ~ 3329012 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU518583
GGGGCAAGTTGCCACATGGGTTTTAAATGTTGTGTTTCGAGTAATTAGCTACTGTTTTAATGTTTCATTGTTTCATAATTGTTTTCATAATTGTTTTCATAATTTCATAATTGTTGTAGTATTGAAATAGGATAACAGCAATTAAATAACATAATTATATGTTAAATACAAATATGCTGAGGATGCTTTAACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCCCTTTCATAAAGATTTATTCCACAGGTCTGTCATAATCAGGCAAATATACATTAACATACAGAATATCGCCCTCTTCTGATGCTCCACACGTTAAATAACGCAATAATTCAAGACACACACGTTTCTACTTAAAAGAACAATAACAATACATCATAACAACAACAACAATAATTAATATCATAATGATAGCCAAACATTGTGTATTTCCAAGTTGTATTTTCTAAAATTCATTATATAGTGACTCTTTTAAGGTGCACCACATAAATGGCAGGTGACTTTTTAAAGAAACTTTGCACCATGACACACAGTGAAATAGACAGAGACTTTTTGCAAACGTTTTTTATGTATATAAGTGTCTTTTTAAGGTTCTACTCCTCTTCTTTCACTTCCTCAAAGTGCTTCCACAGAAATCTGCGGTTTCTGTCTGTGTTTCTAAAGTTAAAGCAGTCTTTTTGTTGGTTTGGCACACGTCAGGGGTGGAAGCAGTGGTAGCGTAAGGCTTCTCTTCTCTCACAGAAGGCTCTGCTCTCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU518583 True 757 lncRNA 0.32 2 3294651 3329012

Neighbor

gene id symbol gene type direction distance location
CI01000319_03283470_03293866 OSCP1A coding upstream 725 3283431 ~ 3293926 (+)
CI01000319_03238023_03240147 NA coding upstream 54368 3238023 ~ 3240283 (+)
CI01000319_03139476_03152542 NEDD9 coding upstream 142081 3139373 ~ 3152570 (+)
CI01000319_03125942_03128108 NA coding upstream 166123 3125866 ~ 3128528 (+)
CI01000319_03067481_03071297 NA coding upstream 223304 3066768 ~ 3071477 (+)
CI01000319_03389749_03391750 NA coding downstream 60737 3389749 ~ 3391991 (+)
CI01000319_03394244_03396334 BTR26, BTR18, BTY, BTR25, BTR22 coding downstream 65232 3394244 ~ 3396614 (+)
CI01000319_03402932_03447997 BTR26, BTR25, BTR24, BTY, BTR22, BTR18 coding downstream 73100 3402112 ~ 3448275 (+)
CI01000319_03483504_03487172 NA coding downstream 151971 3480983 ~ 3488654 (+)
CI01000319_03500024_03502600 NA coding downstream 170260 3499272 ~ 3502830 (+)
G451682 NA non-coding upstream 35483 3172160 ~ 3259168 (+)
G451681 NA non-coding upstream 76068 3170682 ~ 3218583 (+)
G451683 NA non-coding upstream 82446 3180896 ~ 3212205 (+)
G451690 NA non-coding upstream 88285 3189616 ~ 3206366 (+)
G451655 NA non-coding upstream 132283 3114527 ~ 3162368 (+)
G451666 NA non-coding downstream 21727 3350739 ~ 3375767 (+)
G451741 NA non-coding downstream 47417 3376429 ~ 3376706 (+)
G452051 NA non-coding downstream 134484 3463496 ~ 3464355 (+)
G451677 NA other upstream 65320 3216340 ~ 3229331 (+)
G451500 NA other upstream 455702 2838086 ~ 2838949 (+)
G451485 NA other upstream 550128 2742741 ~ 2744523 (+)
G451357 NA other upstream 803358 2467916 ~ 2491293 (+)
G451367 NA other upstream 812230 2481064 ~ 2482421 (+)
G451662 NA other downstream 4269 3333281 ~ 3334824 (+)
G452043 NA other downstream 170314 3500279 ~ 3500512 (+)
CI01000319_04515268_04534770 NA other downstream 1202607 4515268 ~ 4536025 (+)
CI01000319_04787066_04788609 EIF1B, EIF1, GM6900 other downstream 1458028 4787040 ~ 4790529 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_007747 CR381540.1 non-coding NC_007125.7 CM002898.2 11366695 ~ 11374026 (-)