G451666


Basic Information

Item Value
gene id G451666
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000319
NCBI id null
chromosome length 6428943
location 3350739 ~ 3375767 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU518590
GCCCGTTCCTCTCGCCGCTTTTTGGCCTGTTTCTGTCTTTGTTCTGAACTCATCCCATCTTTTTTTTGGGTTGGGACTGGCTCCGGGTGTGCTGGGTCTTCCGTCAGATTTGATTGGTTCTGTTTTTGAGGGAGGGTCTGTTATGAAGGAAGAGTCTGTGACCGTTGTGTCGTCGGCTTTCAGGATCTCACTGTCCAGTTCACTCTCTTTCTGAAGCGTGCCACTCGTCTCTGGAGGAGATGTGAGAACTTTGTCTGACAGCGTCAGTTTTTCTTCAAAGCTGCTCTCTAGAGCCTTGTTCTCCATTTTGTTCATGGTTTGTTGTCAGTCATTCCATTACAGGGTCCAAAAGAGACGCGTAAAAAGAGGAACTCCCAGTTATGAACACACCCGAATACGGTGGCCCTTTAAATCTGATCAATAACAAACAGTTGAGCTCTATTAAAAGAGAAAAACGATCGATGATAGATTAAATTCGCTATTCCCACTGAATTGTGTGATCTCAGCTGTGAAAACTAAAGATAGAAGAAGAGGGGGGCCCAGGTCCGGGGCCCTGCCCACCACACAGCAG
>TU518591
GCCCGTTCCTCTCGCCGCTTTTTGGCCTGTTTCTGTCTTTGTTCTGAACTCATCCCATCTTTTTTTTGGGTTGGGACTGGCTCCGGGTGTGCTGGGTCTTCCGTCAGATTTGATTGGTTCTGTTTTTGAGGGAGGGTCTGTTATGAAGGAAGAGTCTGTGACCGTTGTGTCGTCGGCTTTCAGGATCTCACTGTCCAGTTCACTCTCTTTCTGAAGCGTGCCACTCGTCTCTGGAGGAGATGTGAGAACTGAGAGAAAGACAAAAAGAGAACATGGATGAAAGTAATCAAAACTAGAATCATGCTTCTAGTTCAGTTTTCACCAAAATACTATACTGGTCATTTGGAATTAGCCATCACTATCATATTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU518590 False 571 lncRNA 0.47 3 3350739 3375767
TU518591 True 369 lncRNA 0.45 2 3350739 3355184

Neighbor

gene id symbol gene type direction distance location
CI01000319_03307678_03308097 NA coding upstream 42276 3306484 ~ 3308463 (+)
CI01000319_03295425_03299640 LSM10 coding upstream 50063 3295425 ~ 3300676 (+)
CI01000319_03283470_03293866 OSCP1A coding upstream 56813 3283431 ~ 3293926 (+)
CI01000319_03238023_03240147 NA coding upstream 110456 3238023 ~ 3240283 (+)
CI01000319_03139476_03152542 NEDD9 coding upstream 198169 3139373 ~ 3152570 (+)
CI01000319_03389749_03391750 NA coding downstream 13982 3389749 ~ 3391991 (+)
CI01000319_03394244_03396334 BTR26, BTR18, BTY, BTR25, BTR22 coding downstream 18477 3394244 ~ 3396614 (+)
CI01000319_03402932_03447997 BTR26, BTR25, BTR24, BTY, BTR22, BTR18 coding downstream 26345 3402112 ~ 3448275 (+)
CI01000319_03483504_03487172 NA coding downstream 105216 3480983 ~ 3488654 (+)
CI01000319_03500024_03502600 NA coding downstream 123505 3499272 ~ 3502830 (+)
G451663 NA non-coding upstream 21727 3294651 ~ 3329012 (+)
G451667 NA non-coding upstream 38799 3211189 ~ 3311940 (+)
G451682 NA non-coding upstream 91571 3172160 ~ 3259168 (+)
G451681 NA non-coding upstream 132156 3170682 ~ 3218583 (+)
G451683 NA non-coding upstream 138534 3180896 ~ 3212205 (+)
G451741 NA non-coding downstream 662 3376429 ~ 3376706 (+)
G452051 NA non-coding downstream 87729 3463496 ~ 3464355 (+)
G452053 NA non-coding downstream 129977 3505744 ~ 3506186 (+)
G451662 NA other upstream 15915 3333281 ~ 3334824 (+)
G451677 NA other upstream 121408 3216340 ~ 3229331 (+)
G451500 NA other upstream 511790 2838086 ~ 2838949 (+)
G451485 NA other upstream 606216 2742741 ~ 2744523 (+)
G451357 NA other upstream 859446 2467916 ~ 2491293 (+)
G452043 NA other downstream 123559 3500279 ~ 3500512 (+)
CI01000319_04515268_04534770 NA other downstream 1155852 4515268 ~ 4536025 (+)
CI01000319_04787066_04788609 EIF1B, EIF1, GM6900 other downstream 1411273 4787040 ~ 4790529 (+)
G452541 NA other downstream 1963755 5336085 ~ 5353023 (+)

Expression


Co-expression Network