G452309


Basic Information

Item Value
gene id G452309
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000319
NCBI id null
chromosome length 6428943
location 4548607 ~ 4548821 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU519324
CTTAAAGTGACAGCAGCCTAATAAACTTGCTGCTGTCTGCGTCATTAATGTTAATCAAAGAACAAAAGACAAAGAGGAAATCACTCACTGCTCTTGACTGAATGACTTTTGTAGCTTTAATAAAGATTGATCTATATTCAATTTATTATTTATGCAACAAAAACTGTGCAGTGTTTTGTTATTCAATTTCTGTATATTTACCAGTTAGACCTACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU519324 True 215 lncRNA 0.32 1 4548607 4548821

Neighbor

gene id symbol gene type direction distance location
CI01000319_04536287_04545417 STARD3 coding upstream 1739 4536287 ~ 4546868 (+)
CI01000319_04515268_04534770 NA coding upstream 13705 4515268 ~ 4536025 (+)
CI01000319_04478393_04509691 CDK12, CDK13 coding upstream 38270 4478393 ~ 4510337 (+)
CI01000319_04424107_04437627 NA coding upstream 110760 4423822 ~ 4437847 (+)
CI01000319_04002430_04030246 FAM135B coding upstream 518244 4002430 ~ 4030363 (+)
CI01000319_04550077_04553516 MREG coding downstream 148 4548969 ~ 4555108 (+)
CI01000319_04581466_04584558 ENO2, ENOG coding downstream 32645 4581466 ~ 4584565 (+)
CI01000319_04626091_04632375 ZNF646 coding downstream 76939 4625760 ~ 4632569 (+)
CI01000319_04697405_04706265 NA coding downstream 146342 4695163 ~ 4706544 (+)
CI01000319_04714806_04715176 NA coding downstream 165985 4714806 ~ 4715569 (+)
G452277 NA non-coding upstream 30574 4516692 ~ 4518033 (+)
G452306 NA non-coding upstream 71274 4477095 ~ 4477333 (+)
G452267 NA non-coding upstream 96142 4449389 ~ 4452465 (+)
G452300 NA non-coding upstream 100574 4447789 ~ 4448033 (+)
G452257 NA non-coding downstream 12218 4561039 ~ 4561688 (+)
G452256 NA non-coding downstream 26551 4575372 ~ 4582676 (+)
G452274 NA non-coding downstream 46848 4595669 ~ 4601541 (+)
G452261 NA non-coding downstream 116299 4665120 ~ 4761324 (+)
G452351 NA non-coding downstream 229089 4777910 ~ 4778144 (+)
G452043 NA other upstream 1003888 3500279 ~ 3500512 (+)
CI01000319_03402932_03447997 BTR26, BTR25, BTR24, BTY, BTR22, BTR18 other upstream 1128007 3402112 ~ 3448275 (+)
G451662 NA other upstream 1213783 3333281 ~ 3334824 (+)
G451677 NA other upstream 1319276 3216340 ~ 3229331 (+)
CI01000319_04787066_04788609 EIF1B, EIF1, GM6900 other downstream 238219 4787040 ~ 4790529 (+)
G452541 NA other downstream 790701 5336085 ~ 5353023 (+)
G452545 NA other downstream 804873 5353694 ~ 5356035 (+)
G452543 NA other downstream 810879 5359700 ~ 5371484 (+)
G452735 NA other downstream 1159341 5712686 ~ 5712732 (+)

Expression


Co-expression Network