G452351


Basic Information

Item Value
gene id G452351
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000319
NCBI id null
chromosome length 6428943
location 4777910 ~ 4778144 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU519371
CACAACTAAGCCCCATTGATACCAAACCTTATGAAAAACTAGTATACTTCAAGTTCATTTGATCAAGTATACTAAAGTAATGTTCAAGTATATTTTAAGTATACTTTATGTAGTAAGTATACTAGTATCAATGTACTAGTAGTAAACTTGTAAGTGTACTATTTTAATACCGCTTGGGACTAAATTGGCCCAACTGAAGTATACGTTTAAGTGTACTATAAGTGTTAACAGCAGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU519371 True 235 lncRNA 0.31 1 4777910 4778144

Neighbor

gene id symbol gene type direction distance location
CI01000319_04741909_04748409 NA coding upstream 28967 4740980 ~ 4748943 (+)
CI01000319_04716980_04720666 NA coding upstream 57238 4716441 ~ 4720672 (+)
CI01000319_04714806_04715176 NA coding upstream 62341 4714806 ~ 4715569 (+)
CI01000319_04697405_04706265 NA coding upstream 71366 4695163 ~ 4706544 (+)
CI01000319_04626091_04632375 ZNF646 coding upstream 145341 4625760 ~ 4632569 (+)
CI01000319_04787066_04788609 EIF1B, EIF1, GM6900 coding downstream 8922 4787040 ~ 4790529 (+)
CI01000319_04869169_04900787 PLAK, JUPB coding downstream 91025 4869169 ~ 4900900 (+)
CI01000319_04907275_04915465 WIPF2B coding downstream 128862 4907006 ~ 4915596 (+)
CI01000319_04931863_04933044 NA coding downstream 153509 4931653 ~ 4933086 (+)
CI01000319_04949418_04952350 PDK2B coding downstream 171161 4949305 ~ 4952350 (+)
G452261 NA non-coding upstream 16586 4665120 ~ 4761324 (+)
G452274 NA non-coding upstream 176369 4595669 ~ 4601541 (+)
G452256 NA non-coding upstream 195234 4575372 ~ 4582676 (+)
G452257 NA non-coding upstream 216222 4561039 ~ 4561688 (+)
G452309 NA non-coding upstream 229089 4548607 ~ 4548821 (+)
G452390 NA non-coding downstream 166809 4944953 ~ 4945452 (+)
G452427 NA non-coding downstream 280838 5058982 ~ 5059335 (+)
G452458 NA non-coding downstream 374582 5152726 ~ 5153054 (+)
G452455 NA non-coding downstream 379236 5157380 ~ 5159750 (+)
G452504 NA non-coding downstream 386035 5164179 ~ 5168282 (+)
CI01000319_04515268_04534770 NA other upstream 241885 4515268 ~ 4536025 (+)
G452043 NA other upstream 1233191 3500279 ~ 3500512 (+)
CI01000319_03402932_03447997 BTR26, BTR25, BTR24, BTY, BTR22, BTR18 other upstream 1357310 3402112 ~ 3448275 (+)
G451662 NA other upstream 1443086 3333281 ~ 3334824 (+)
G451677 NA other upstream 1548579 3216340 ~ 3229331 (+)
G452541 NA other downstream 561378 5336085 ~ 5353023 (+)
G452545 NA other downstream 575550 5353694 ~ 5356035 (+)
G452543 NA other downstream 581556 5359700 ~ 5371484 (+)
G452735 NA other downstream 930018 5712686 ~ 5712732 (+)

Expression


Co-expression Network