G452390


Basic Information

Item Value
gene id G452390
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000319
NCBI id null
chromosome length 6428943
location 4944953 ~ 4945452 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU519412
GGGCGATTTAAGACATGATGCTTGCTGTTTGACAACTGTTGTGCCTCAGCTCAGTCATGAACTTGTATATATATATATATATATATAAAAAGTTTACACTGTCGCTGGTAAAAACATTCTCATCTTATTTCATCTTAGGGTACGTTTATACGACAACGATGTGCTAAAAACGTAAAAGTTTTTTCTTTGTACAGATGGCAACGTTATCAAAACTATCCCCGTTCACGCGGATCCGGGAAAATGACTAAAAACGCTGTATTACGCATGCCAGACAAGTAGTTGGCGATGCCACTTTGTAAAGAAAGATTACGCGTCTGCTCATACGCATTCTTTTACACAGCACTCGCGCCAAATGCGCATGCTTATCCACCTTATTTTTACAGTTTACTGCACTTTGATATTCTACTCGTTATTTCCCTATAGTGGCTAATAAACTAGTATGGCACATTCATACAGAAAACACGCTGAAAAATAAGGTGGATAGACCAGAGCCGTTAAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU519412 True 500 lncRNA 0.38 1 4944953 4945452

Neighbor

gene id symbol gene type direction distance location
CI01000319_04931863_04933044 NA coding upstream 11867 4931653 ~ 4933086 (+)
CI01000319_04907275_04915465 WIPF2B coding upstream 29357 4907006 ~ 4915596 (+)
CI01000319_04869169_04900787 PLAK, JUPB coding upstream 44053 4869169 ~ 4900900 (+)
CI01000319_04787066_04788609 EIF1B, EIF1, GM6900 coding upstream 156248 4787040 ~ 4790529 (+)
CI01000319_04741909_04748409 NA coding upstream 196010 4740980 ~ 4748943 (+)
CI01000319_04949418_04952350 PDK2B coding downstream 3853 4949305 ~ 4952350 (+)
CI01000319_05112104_05116909 NA coding downstream 166181 5111633 ~ 5117074 (+)
CI01000319_05435510_05450379 NA coding downstream 489777 5435229 ~ 5450632 (+)
CI01000319_05618356_05625888 FLOT1, FLOT1A coding downstream 672904 5618356 ~ 5626767 (+)
CI01000319_05651284_05669061 KIFC1, ZBTB22B coding downstream 705662 5651114 ~ 5671460 (+)
G452351 NA non-coding upstream 166809 4777910 ~ 4778144 (+)
G452261 NA non-coding upstream 183629 4665120 ~ 4761324 (+)
G452274 NA non-coding upstream 343412 4595669 ~ 4601541 (+)
G452256 NA non-coding upstream 362277 4575372 ~ 4582676 (+)
G452257 NA non-coding upstream 383265 4561039 ~ 4561688 (+)
G452427 NA non-coding downstream 113530 5058982 ~ 5059335 (+)
G452458 NA non-coding downstream 207274 5152726 ~ 5153054 (+)
G452455 NA non-coding downstream 211928 5157380 ~ 5159750 (+)
G452504 NA non-coding downstream 218727 5164179 ~ 5168282 (+)
G452518 NA non-coding downstream 266316 5211768 ~ 5211981 (+)
CI01000319_04515268_04534770 NA other upstream 408928 4515268 ~ 4536025 (+)
G452043 NA other upstream 1400234 3500279 ~ 3500512 (+)
CI01000319_03402932_03447997 BTR26, BTR25, BTR24, BTY, BTR22, BTR18 other upstream 1524353 3402112 ~ 3448275 (+)
G451662 NA other upstream 1610129 3333281 ~ 3334824 (+)
G452541 NA other downstream 394070 5336085 ~ 5353023 (+)
G452545 NA other downstream 408242 5353694 ~ 5356035 (+)
G452543 NA other downstream 414248 5359700 ~ 5371484 (+)
G452735 NA other downstream 762710 5712686 ~ 5712732 (+)
G452884 NA other downstream 1177192 6122644 ~ 6124939 (+)

Expression


Co-expression Network