G452427


Basic Information

Item Value
gene id G452427
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000319
NCBI id null
chromosome length 6428943
location 5058982 ~ 5059335 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU519451
GTCCATTTCAGTCCAGTGGTAAAGTGAAAGTTTTTTTCTGTTTTGTGCTCAATACAGCAGTGCATATTATTCTAAAGAGAAAAATAGTATGTCTTTCATCAAAATGTAATAACTTTCTCCACTAAAAATATTGTTAACCAACAGTCAAGTGGCTTAAAAAAATATTAAAGAAAAAAAATTGTAGACTATTGTAATCTTGCCATAAAATAATTCAATTCTGGTTAACAATAATGCTATATTATATTATATTATATTATATTATATTATACTATACTATACTCTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU519451 True 284 lncRNA 0.25 2 5058982 5059335

Neighbor

gene id symbol gene type direction distance location
CI01000319_04949418_04952350 PDK2B coding upstream 106632 4949305 ~ 4952350 (+)
CI01000319_04931863_04933044 NA coding upstream 125896 4931653 ~ 4933086 (+)
CI01000319_04907275_04915465 WIPF2B coding upstream 143386 4907006 ~ 4915596 (+)
CI01000319_04869169_04900787 PLAK, JUPB coding upstream 158082 4869169 ~ 4900900 (+)
CI01000319_04787066_04788609 EIF1B, EIF1, GM6900 coding upstream 270277 4787040 ~ 4790529 (+)
CI01000319_05112104_05116909 NA coding downstream 52298 5111633 ~ 5117074 (+)
CI01000319_05435510_05450379 NA coding downstream 375894 5435229 ~ 5450632 (+)
CI01000319_05618356_05625888 FLOT1, FLOT1A coding downstream 559021 5618356 ~ 5626767 (+)
CI01000319_05651284_05669061 KIFC1, ZBTB22B coding downstream 591779 5651114 ~ 5671460 (+)
CI01000319_05684798_05685353 NA coding downstream 625081 5684416 ~ 5685353 (+)
G452390 NA non-coding upstream 113530 4944953 ~ 4945452 (+)
G452351 NA non-coding upstream 280838 4777910 ~ 4778144 (+)
G452261 NA non-coding upstream 297658 4665120 ~ 4761324 (+)
G452274 NA non-coding upstream 457441 4595669 ~ 4601541 (+)
G452256 NA non-coding upstream 476306 4575372 ~ 4582676 (+)
G452458 NA non-coding downstream 93391 5152726 ~ 5153054 (+)
G452455 NA non-coding downstream 98045 5157380 ~ 5159750 (+)
G452504 NA non-coding downstream 104844 5164179 ~ 5168282 (+)
G452518 NA non-coding downstream 152433 5211768 ~ 5211981 (+)
G452574 NA non-coding downstream 234983 5294318 ~ 5294529 (+)
CI01000319_04515268_04534770 NA other upstream 522957 4515268 ~ 4536025 (+)
G452043 NA other upstream 1514263 3500279 ~ 3500512 (+)
CI01000319_03402932_03447997 BTR26, BTR25, BTR24, BTY, BTR22, BTR18 other upstream 1638382 3402112 ~ 3448275 (+)
G451662 NA other upstream 1724158 3333281 ~ 3334824 (+)
G452541 NA other downstream 280187 5336085 ~ 5353023 (+)
G452545 NA other downstream 294359 5353694 ~ 5356035 (+)
G452543 NA other downstream 300365 5359700 ~ 5371484 (+)
G452735 NA other downstream 648827 5712686 ~ 5712732 (+)
G452884 NA other downstream 1063309 6122644 ~ 6124939 (+)

Expression


Co-expression Network